ggKbase home page

RTP_11222018_0_1um_scaffold_2315_3

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(1398..2138)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F4CF46 similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 246.0
  • Bit_score: 368
  • Evalue 4.40e-99
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:KIF82160.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 246.0
  • Bit_score: 357
  • Evalue 1.10e-95
flgF; flagellar basal-body rod protein flgf similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 246.0
  • Bit_score: 350
  • Evalue 2.00e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGATAGGCTAATCTACACCGCGATGACGGGCGCGAAGCATGTTATCGAACAACAGGCTAACACCTCACACAACCTTGCCAATGCCATGACCACTGGTTTTCGTGCACAGTTGGATAGTTTTCGTGCTGTACCCGTGTTAGGCGGTAGCTTACCCACCCGTGCTTTTGTAGTGGATTCAACAGTAGGTACGGACTTTACTCCAGGACCTATACAGCAAACAGGGCGTGACTTAGATGTGGCCATGCAGGGAAAAGGCTGGCTGGCAGTGGACGTGGGTAATGGCACAGAAGCTTATACCCGCAATGGCAGCTTGAAAATAAATGAAAATGGCCTGTTGCAAACGCAAGCTGGCTTGAACGTATTAGGTGAGTCCGGTCCGATTACCATCCCGCCTGATGAGAATGTGGCGATTGCTAAAGACGGTACCGTGTCTAGTATTCCTAGAGCGGGTGCTGCAACTTCAGTAAATATTATTGGCCGGATTAAATTAGTCAATCCACCCGAAGTGAATCTAGTGCGGGGTGATGATGGTCTGTTTCGCACCAAGGACGGTAAGCCAGCCGATGCGGATGCTATCGTTACTGTTGTCAACGGAGCGGTTGAAGGCAGTAACGTCAACGTGGTATCCGCCATGGTAAATATGATTAGTTTGGCGCGACAGTTCGAAATGCAGATGAAATTACTCACTAATGCCGAGAACAACGCCAATAAAGCAGGTCAGATCCTGAATTTATCTTAA
PROTEIN sequence
Length: 247
MDRLIYTAMTGAKHVIEQQANTSHNLANAMTTGFRAQLDSFRAVPVLGGSLPTRAFVVDSTVGTDFTPGPIQQTGRDLDVAMQGKGWLAVDVGNGTEAYTRNGSLKINENGLLQTQAGLNVLGESGPITIPPDENVAIAKDGTVSSIPRAGAATSVNIIGRIKLVNPPEVNLVRGDDGLFRTKDGKPADADAIVTVVNGAVEGSNVNVVSAMVNMISLARQFEMQMKLLTNAENNANKAGQILNLS*