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RTP_11222018_0_1um_scaffold_2769_14

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(12552..13406)

Top 3 Functional Annotations

Value Algorithm Source
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] id=12497947 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 215.0
  • Bit_score: 339
  • Evalue 3.30e-90
isopropylmalate isomerase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 215.0
  • Bit_score: 338
  • Evalue 1.20e-90
3-isopropylmalate dehydratase large subunit {ECO:0000255|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01026};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 215.0
  • Bit_score: 338
  • Evalue 6.00e-90

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
AGTATGGAAGGACGGATGACGCTGTGTAATATGGCGATAGAAGCCGGTGCACGTGCCGGCATGGTCGCTGTGGATGCTAAAACCATAGATTACGTGCGTGGTCGTCCTGCTGCACCTGCGGGTGCTATGTGGGACCAGGCAGTGGTTTGGTGGGAGACGCTGGTGTCGGATGCCGATGCCGTGTTTGACCATGAGGTCACGCTGAATGCTGCGGATATTGAGCCACAAGTGACTTGGGGTACGTCACCAGAAATGGTGTTGGCAGTGACAGGGAGTGTACCTAATCCGGCTGCTGCCCCAGATGCGGTTAAACGTGGTGATTGGGAGCGAGCACTGGTTTATATGGGCTTGGCAGCGGGCACTGCAATAACTGATATTGCGATAGACAAAGTGTTTATCGGTTCCTGTACCAATTCACGTATAGAAGATTTGCGCGCAGCAGCGGCGGTGATTAAAGGTCGCAAAAAAGCCGCTAATGTGACCTTGGCAATGGTCGTGCCAGGTTCAGGTCTAGTCAAGCGACAAGCTGAGCAAGAAGGTTTGGATAAGCTGTTTATTGATGCCGGTTTTGAGTGGCGGGATCCAGGTTGCTCGATGTGCTTGGCAATGAATGCGGACAGACTGGAGCCAGGCAGGGTGGTCGCACTCATTTGGTCAGTCCCGCGATGGCCGCTGCGGCGGCATTGGCGGGTCATTTTGTTGATGTGCGGGAATTTTGAAAGGATGAATATGCGTAAATTGACGTTGCTGATCACAGTATTGATGCTGCTAAATTTGTCTGCGTGTAATACCATGCATGGTCTTGGGCAAGATGTGGAAAAAGCGGGTGAAGCGATACAGAAAGGTGCCAAGTGA
PROTEIN sequence
Length: 285
SMEGRMTLCNMAIEAGARAGMVAVDAKTIDYVRGRPAAPAGAMWDQAVVWWETLVSDADAVFDHEVTLNAADIEPQVTWGTSPEMVLAVTGSVPNPAAAPDAVKRGDWERALVYMGLAAGTAITDIAIDKVFIGSCTNSRIEDLRAAAAVIKGRKKAANVTLAMVVPGSGLVKRQAEQEGLDKLFIDAGFEWRDPGCSMCLAMNADRLEPGRVVALIWSVPRWPLRRHWRVILLMCGNFERMNMRKLTLLITVLMLLNLSACNTMHGLGQDVEKAGEAIQKGAK*