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RTP_11222018_0_1um_scaffold_4257_3

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(1589..2827)

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 396.0
  • Bit_score: 584
  • Evalue 1.80e-164
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 396.0
  • Bit_score: 584
  • Evalue 9.10e-164
Diaminopimelate decarboxylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AZU0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 396.0
  • Bit_score: 584
  • Evalue 6.50e-164

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Taxonomy

Sulfuricella denitrificans → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGAATTTAACTGCATTACCCGCAAGCCAACTCAATTATATTGCCGAAACTTACGACACGCCTTGCTACGTCTATGACCACGCCGCTTTGGTCAGCGCGTTCCAGTCATTTGATAACGCGCTTAAAAACCGCCCACACCTGGTGTGTTACGCGGTAAAAGCGAATCCGAGCTTGGCGATATTGAACACCTTTGCCCGCTTGGGTGCGGGTTTCGATATTGTCTCAGGTGGCGAATTAGCGCGGGTTCTCGCCGCGGGTGGCGATGCAAATAAAGTCGTGTTCTCTGGCGTGGGTAAGACCGCTGATGAAATGCGGTTAGCACTAACCCATGGCATTAAGTGTTTTAACGTCGAATCTGCCAGTGAATTATCGCGCTTGAATAGGATAGCGGGTGAAATGGGTAAAATCGCACCGATTAGCTTGCGAGTGAATCCCGATGTCGATGCAAAAACACATCCATATATTTCTACCGGTCTTAAAGGCAATAAATTTGGGGTCGCGCATGAGGACGCGGTAGAGTTATATCAGCGTGCCGCAACGATGCCTCACTTGAAAATCACTGGAATAGATTGCCATATTGGCTCACAACTCACGGAAACTCGCCCCTTCGCCGACGCGCTGGATCGCGTATTAGCACTCGTTGATGCCTTAGCAGCTATGGGTATTCATTTGGAGCACATGGATTTAGGGGGTGGTTTGGGTATTTGTTACGATGCAGAAACGCCGCCGCCTGTGGTCGATTATATAGACGCATTACTACAAAAATTAACGGGACGGACGCAGACCATATTGCTGGAACCAGGTCGGGCATTGGTCGGCAATGCGGGGGTGTTGTTGACGCGTGTGGAATATCTGAAAGCGGGTGTAGAGAAAAATTTTGCCATCGTTGATGCGGCCATGAATGACTTAATGCGTCCGGCTCTATATGACGCGTACCACGCCATCGTACCCGTCAATCCGCGCGATGAGGCCGCAATGATTTATGAAGTAGTCGGACCTGTGTGTGAGACAGGCGATTTCCTTGGTCATGCACGCAAATTGGCGTTAGCTGAAGGTGATTTGTTAGCGATAATGTCGGCAGGCGCTTATGGCATGTCGATGAGCTCCAATTACAACACCCGCCCTCGTGCTACTGAAGTAATGGTGCGAGATGGCGTTGCTACAGTCATACGCGAACGCGAGCAAATTGTAGATTTATTTAAGTCAGAACGGATATTGGACGCGCAAATCGGCGCTTAA
PROTEIN sequence
Length: 413
MNLTALPASQLNYIAETYDTPCYVYDHAALVSAFQSFDNALKNRPHLVCYAVKANPSLAILNTFARLGAGFDIVSGGELARVLAAGGDANKVVFSGVGKTADEMRLALTHGIKCFNVESASELSRLNRIAGEMGKIAPISLRVNPDVDAKTHPYISTGLKGNKFGVAHEDAVELYQRAATMPHLKITGIDCHIGSQLTETRPFADALDRVLALVDALAAMGIHLEHMDLGGGLGICYDAETPPPVVDYIDALLQKLTGRTQTILLEPGRALVGNAGVLLTRVEYLKAGVEKNFAIVDAAMNDLMRPALYDAYHAIVPVNPRDEAAMIYEVVGPVCETGDFLGHARKLALAEGDLLAIMSAGAYGMSMSSNYNTRPRATEVMVRDGVATVIREREQIVDLFKSERILDAQIGA*