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RTP_11222018_0_1um_scaffold_4257

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_4257_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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114..920
DNA (807bp) protein (269aa)
ABC-type phosphate/phosphonate transport system periplasmic component-like protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E9B6_GEOLS
phosphate/phosphonate ABC transporter periplasmic protein PhnD family protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_4257_2
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1000..1545
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B114_9PROT
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_4257_3
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1589..2827)
DNA (1239bp) protein (413aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Diaminopimelate decarboxylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AZU0_9PROT
RTP_11222018_0_1um_scaffold_4257_4

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2993..3307
DNA (315bp) protein (105aa)
Frataxin-like n=1 Tax=mine drainage metagenome RepID=E6QSE2_9ZZZZ
Frataxin-like {ECO:0000313|EMBL:CBI10164.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_4257_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3528..3992
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003714F29
DoxX family protein
Tax=CG_Hydro_01
RTP_11222018_0_1um_scaffold_4257_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3995..4558
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Methylophilus RepID=UPI00036E2007
ECF subfamily RNA polymerase sigma-24 subunit
Tax=CG_Hydro_01
RTP_11222018_0_1um_scaffold_4257_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4561..4827
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003701E41
hypothetical protein
Tax=CG_Hydro_01
Displaying 7 items

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