ggKbase home page

RTP_11222018_0_1um_scaffold_5742_8

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 4826..5266

Top 3 Functional Annotations

Value Algorithm Source
id=4961698 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 142.0
  • Bit_score: 97
  • Evalue 1.10e-17
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 144.0
  • Bit_score: 100
  • Evalue 1.40e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gamma2_60_33 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGAAACACTCAGCAATAGCAAAAATGGGCGCGTTATTACTAATCACTGGCACTGCCTTTGCAGTTCCTGCGTATGCAGCTAACACGACTACCGAGCCAATGGTGAAAAGCGGGCATGAGCATGACCATAAACATGATGCTACGGCTATGCCGGGCAACAAGAATGGCGCGGGTGCACAACAAATGTCGGGCGTGATGATGGGTATGTCGACTGAAATGAAGGATATGTCCGGCATGGTACAAAATGGCAACATGAGCCCCGCCACCATGAAAAAAATGTCTACCCAGATGAAACAGATGGGCGACATGATGCACAACATGTCTGGCATGATGCATAAAAACATGAAGATGGATGCAGGAATGCAAAATAAAATGGGTCAAATGCAGAAGCAAATGGAACAAATGAACAAGGATATGCCTGCAACATCGGCAAATATGTAA
PROTEIN sequence
Length: 147
MKHSAIAKMGALLLITGTAFAVPAYAANTTTEPMVKSGHEHDHKHDATAMPGNKNGAGAQQMSGVMMGMSTEMKDMSGMVQNGNMSPATMKKMSTQMKQMGDMMHNMSGMMHKNMKMDAGMQNKMGQMQKQMEQMNKDMPATSANM*