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RTP_11222018_0_1um_scaffold_5742

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_5742_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..238
DNA (237bp) protein (79aa)
Putative transmembrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJR3_9PROT
putative transmembrane protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_5742_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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238..750
DNA (513bp) protein (171aa)
Probable prolin-rich transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJB5_THIDA
Uncharacterized protein {ECO:0000313|EMBL:GAO36450.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
prolin-rich transmembrane protein
RTP_11222018_0_1um_scaffold_5742_3
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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747..2732
DNA (1986bp) protein (662aa)
Type II secretory pathway, component HofQ n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADN8_9PROT
type II secretory pathway, component HofQ
Type II secretory pathway, component HofQ {ECO:0000313|EMBL:BAN36613.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_11222018_0_1um_scaffold_5742_4
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2733..3212
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSW7_SIDLE
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_5742_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3212..3565
DNA (354bp) protein (118aa)
N-terminal methylation site n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5V1_NITMU
N-terminal methylation site
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_5742_6
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3593..4111
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D77FFA
gspG; type II secretion system pseudopilin PulG
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_11222018_0_1um_scaffold_5742_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4321..4665
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90336.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_5742_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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4826..5266
DNA (441bp) protein (147aa)
id=4961698 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RTP_11222018_0_1um_scaffold_5742_9
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5426..6034)
DNA (609bp) protein (203aa)
Lytic transglycosylase catalytic n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABA5_9PROT
lytic transglycosylase catalytic
Lytic transglycosylase catalytic {ECO:0000313|EMBL:BAN36620.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_11222018_0_1um_scaffold_5742_10
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(6152..7222)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003733615
putative thermolysin family peptidase
Putative thermolysin family peptidase {ECO:0000313|EMBL:BAJ64823.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
RTP_11222018_0_1um_scaffold_5742_11
unknown

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comp(7245..7682)
DNA (438bp) protein (146aa)

This feature has no annotations

Displaying 11 items

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