ggKbase home page

SR-VP_0-2_scaffold_141_1355992

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_1355992_1

Not on your lists

comp(115..648)
DNA (534bp) protein (178aa)
alias=gwe2_scaffold_136_88 id=7201374 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Tax=RIFOXYC12_FULL_TA06_54_24_curated
SR-VP_0-2_scaffold_141_1355992_2
unknown

Not on your lists

comp(730..1875)
DNA (1146bp) protein (382aa)
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MIQ8_9EURY
DNA topoisomerase VI subunit A
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1355992_3
unknown

Not on your lists

comp(1872..3722)
DNA (1851bp) protein (617aa)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG81_9EURY
DNA topoisomerase VI subunit B
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1355992_4
unknown

Not on your lists

comp(3735..3965)
DNA (231bp) protein (77aa)
Transcriptional regulator, AsnC family n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6R5_METTP
AsnC family transcriptional regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1355992_5
unknown

Not on your lists

4085..5617
DNA (1533bp) protein (511aa)
Radical SAM domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAI9_METEZ
radical SAM domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1355992_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5671..6660
DNA (990bp) protein (330aa)
Pyruvate formate lyase activating protein-like uncharacterized Fe-S protein {ECO:0000313|EMBL:KCZ72106.1}; EC=1.97.1.4 {ECO:0000313|EMBL:KCZ72106.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Radical SAM domain protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA01_METMS
radical SAM protein
SR-VP_0-2_scaffold_141_1355992_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6738..7679
DNA (942bp) protein (314aa)
Protein-export membrane protein SecF n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1H3_METHD
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
preprotein translocase subunit SecF
SR-VP_0-2_scaffold_141_1355992_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7676..9349
DNA (1674bp) protein (558aa)
Protein-export membrane protein SecD n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q9I7_METMZ
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Protein-export membrane protein SecD
SR-VP_0-2_scaffold_141_1355992_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9411..10340
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381D41E
Putative GTPase {ECO:0000313|EMBL:KCZ72227.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_1355992_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10359..10745
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RDZ5_9EURY
Putative GTPase {ECO:0000313|EMBL:KCZ72227.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_1355992_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10774..11304
DNA (531bp) protein (177aa)
Phosphodiesterase, MJ0936 family n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EA99_METEZ
Phosphodiesterase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_1355992_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11308..11865)
DNA (558bp) protein (186aa)
Archaeoflavoprotein AfpA n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RHA2_METVM
Archaeoflavoprotein AfpA {ECO:0000313|EMBL:KCZ70315.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
archaeoflavoprotein AfpA
SR-VP_0-2_scaffold_141_1355992_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11939..12367)
DNA (429bp) protein (143aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4A6_DESAP
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_1355992_14
unknown

Not on your lists

comp(12425..12664)
DNA (240bp) protein (80aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_1355992_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12780..13676)
DNA (897bp) protein (299aa)
CoB/CoM heterodisulfide reductase subunit B n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MC31_9EURY
CoB/CoM heterodisulfide reductase subunit B
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_1355992_16
unknown

Not on your lists

comp(13673..14116)
DNA (444bp) protein (148aa)
CoB/CoM heterodisulfide reductase subunit C (EC:1.8.98.1)
CoB/CoM heterodisulfide reductase, subunit C n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9Q4_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1355992_17
unknown

Not on your lists

14334..14525
DNA (192bp) protein (64aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1355992_18
unknown

Not on your lists

comp(14615..15127)
DNA (513bp) protein (171aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Probable deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Methanosarcina mazei RepID=DUT_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_1355992_19
unknown

Not on your lists

comp(15347..15475)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 19 items

View Taxonomy