ggKbase home page

Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_1
unknown

Not on your lists

comp(1..519)
DNA (519bp) protein (173aa)
8-oxoguanine DNA glycosylase
8-oxoguanine DNA glycosylase n=2 Tax=Methanosarcina mazei RepID=Q8PZM1_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_2
unknown

Not on your lists

579..1979
DNA (1401bp) protein (467aa)
DNA primase, small subunit
DNA primase small subunit PriS n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPG2_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1972..2601
DNA (630bp) protein (210aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7R0_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71963.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_4
unknown

Not on your lists

2607..2891
DNA (285bp) protein (95aa)
rpl44e; 50S ribosomal protein L44
UPI0003D1AE67 related cluster n=1 Tax=unknown RepID=UPI0003D1AE67
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_5
unknown

Not on your lists

2894..3067
DNA (174bp) protein (58aa)
rps27e; 30S ribosomal protein S27e
30S ribosomal protein S27e n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8M3_UNCMA
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_6
unknown

Not on your lists

3067..3861
DNA (795bp) protein (265aa)
translation initiation factor IF-2 subunit alpha
UPI0003D1C7E6 related cluster n=1 Tax=unknown RepID=UPI0003D1C7E6
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_7
unknown

Not on your lists

4016..4777
DNA (762bp) protein (254aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B682_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_8
unknown

Not on your lists

4913..5221
DNA (309bp) protein (103aa)
large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEH7_METFS
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_9
unknown

Not on your lists

5383..6009
DNA (627bp) protein (209aa)
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAH4_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_10
unknown

Not on your lists

6002..6790
DNA (789bp) protein (263aa)
ABC transporter
ABC-2 type transporter n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WR56_METH6
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_11
unknown

Not on your lists

comp(6791..7930)
DNA (1140bp) protein (380aa)
thrC-3; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64CL8_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8196..10097
DNA (1902bp) protein (634aa)
DNA gyrase, B subunit
DNA gyrase subunit B n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZ44_METHD
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_13
unknown

Not on your lists

10100..10705
DNA (606bp) protein (202aa)

This feature has no annotations

Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10714..11031
DNA (318bp) protein (106aa)
DNA polymerase subunit beta
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00031412AC
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_15

Not on your lists

11164..11526
DNA (363bp) protein (121aa)
DNA polymerase beta domain-containing protein
DNA polymerase, beta domain protein region id=4071296 bin=GWF2_CPR3_35_18 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_CPR3_35_18 organism_group=CPR3
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


11574..14063
DNA (2490bp) protein (830aa)
DNA gyrase subunit A
DNA gyrase subunit A n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MTS0_9EURY
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_17
unknown

Not on your lists

14060..14182
DNA (123bp) protein (41aa)

This feature has no annotations

Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_18
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14290..14919
DNA (630bp) protein (210aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z254_EUBE2
Uncharacterized protein {ECO:0000313|EMBL:ACR71244.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14967..15230
DNA (264bp) protein (88aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos14B8 RepID=Q64E52_9ARCH
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_20
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15329..15706)
DNA (378bp) protein (126aa)
putative nucleic acid-binding protein, contains PIN domain
Putative nucleic acid-binding protein, contains PIN domain n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BHL2_9EURY
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_21
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15703..15918)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0LS63_9EURY
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_22
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16336..16929
DNA (594bp) protein (198aa)
putative integral membrane sensor protein
Putative integral membrane sensor protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RG99_METP4
Uncharacterized protein {ECO:0000313|EMBL:KKH99547.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_23

Not on your lists

16950..17210
DNA (261bp) protein (87aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4H5_METSW
Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_24
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

17254..17688
DNA (435bp) protein (145aa)
cytosine/adenosine deaminase
cytosine deaminase n=1 Tax=Chlorogloeopsis RepID=UPI0002F3A0DE
Cytosine/adenosine deaminase {ECO:0000313|EMBL:AFY77431.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18098..18418)
DNA (321bp) protein (107aa)
class II aldolase/adducin family protein
Class II aldolase/adducin family protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBP8_METEZ
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:KCZ72644.1}; EC=4.1.2.17 {ECO:0000313|EMBL:KCZ72644.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18423..18920)
DNA (498bp) protein (166aa)
DNA ligase D, 3'-phosphoesterase domain protein
DNA ligase D, 3'-phosphoesterase domain protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAR9_METMS
DNA ligase D-like 3'-phosphoesterase domain-containing protein {ECO:0000313|EMBL:KCZ72645.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KCZ72645.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18875..19510)
DNA (636bp) protein (212aa)
Endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9N6_METMS
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_28
unknown

Not on your lists

19614..19877
DNA (264bp) protein (88aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19923..21026)
DNA (1104bp) protein (368aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8V2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KCZ73237.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methanoperedens_44_19-type_SR-VP_26_10_2019_1_100cm_part_5_30
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21061..22215)
DNA (1155bp) protein (385aa)
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVQ5_METHD
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:AGB49522.1}; Flags: Precursor;; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
Displaying items 1-30 of 142 in total

View Taxonomy