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SR-VP_26_10_2019_2_100cm_scaffold_1321

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1321_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..1306
DNA (1305bp) protein (435aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UH49_CELFN
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADG73252.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SR-VP_26_10_2019_2_100cm_scaffold_1321_2
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1772..3052
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A2F66
hypothetical protein
Tax=GWC1_Azotobacter_66_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_1321_3
GWA2_OD1_38_27, Parcubacteria, Bacteria

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3013..4098
DNA (1086bp) protein (362aa)
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:KKQ68437.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
Aminotransferase, class I and II id=2253544 bin=GWB2_Proteobacteria_55_19 species=Candidatus Puniceispirillum marinum genus=Candidatus Puniceispirillum taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
class I and II aminotransferase
SR-VP_26_10_2019_2_100cm_scaffold_1321_4
RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_12c_curated, Roizmannbacteria, Microgenomates, Bacteria

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4140..5936
DNA (1797bp) protein (599aa)
putative Acetolactate synthase large subunit (EC:2.2.1.6)
Putative Acetolactate synthase, large subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFK8_9BACT
Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_12c_curated
SR-VP_26_10_2019_2_100cm_scaffold_1321_5

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5965..6477
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI00035C53D7
NUDIX hydrolase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
SR-VP_26_10_2019_2_100cm_scaffold_1321_6
RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6539..8059
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002DF286F
radical SAM domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_1321_7
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

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8121..8927
DNA (807bp) protein (269aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS00027.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
Methyltransferase domain protein id=2582824 bin=GWC2_Elusimicrobia_64_44 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1321_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8947..9945
DNA (999bp) protein (333aa)
GHMP kinase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1REX9_METP4
GHMP kinase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1321_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9958..10662
DNA (705bp) protein (235aa)
Nucleotidyl transferase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1REY0_METP4
nucleotidyl transferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1321_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10659..11801
DNA (1143bp) protein (381aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1REY1_METP4
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1321_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11804..12397
DNA (594bp) protein (198aa)
Probable phosphoheptose isomerase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1REY2_METP4
sugar isomerase (SIS)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1321_12
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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12387..12941
DNA (555bp) protein (185aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847); (Methanoplanus petrolearius).;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1REY3_METP4
D,D-heptose 1,7-bisphosphate phosphatase
SR-VP_26_10_2019_2_100cm_scaffold_1321_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13092..14165
DNA (1074bp) protein (358aa)
Glucose-1-phosphate thymidylylransferase, long form {ECO:0000313|EMBL:KCZ70513.1}; EC=2.7.7.24 {ECO:0000313|EMBL:KCZ70513.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Glucose-1-phosphate thymidylyltransferase id=3930362 bin=GWF2_Nitrospirae_44_13 species=Candidatus Magnetobacterium bavaricum genus=Candidatus Magnetobacterium taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RfbA; dTDP-glucose pyrophosphorylase
SR-VP_26_10_2019_2_100cm_scaffold_1321_14
unknown

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14162..14308
DNA (147bp) protein (49aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1321_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14315..14794
DNA (480bp) protein (160aa)
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme {ECO:0000313|EMBL:KCZ70514.1}; EC=5.1.3.13 {ECO:0000313|EMBL:KCZ70514.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ADG0_CARHZ
SR-VP_26_10_2019_2_100cm_scaffold_1321_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14797..15789
DNA (993bp) protein (331aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KCZ70515.1}; EC=4.2.1.46 {ECO:0000313|EMBL:KCZ70515.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
dTDP-glucose 4,6-dehydratase id=3930358 bin=GWF2_Nitrospirae_44_13 species=Candidatus Magnetobacterium bavaricum genus=Candidatus Magnetobacterium taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
dTDP-glucose 4,6-dehydratase
SR-VP_26_10_2019_2_100cm_scaffold_1321_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15732..16658
DNA (927bp) protein (309aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KCZ70516.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KCZ70516.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
dTDP 4-dehydrorhamnose reductase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A0B4_THESM
dTDP 4-dehydrorhamnose reductase
SR-VP_26_10_2019_2_100cm_scaffold_1321_18
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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16939..17520
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TY9_METBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE53087.1}; Flags: Precursor;; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
SR-VP_26_10_2019_2_100cm_scaffold_1321_19
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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17876..20008
DNA (2133bp) protein (711aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S8D4_METSF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC69294.1}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;"
SR-VP_26_10_2019_2_100cm_scaffold_1321_20
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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20250..21659
DNA (1410bp) protein (470aa)
Polysaccharide biosynthesis protein, membrane-associated n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TY8_METBU
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein, membrane-associated {ECO:0000313|EMBL:ABE53088.1}; Flags: Precursor;; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
SR-VP_26_10_2019_2_100cm_scaffold_1321_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21750..22679)
DNA (930bp) protein (310aa)
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:KCZ72084.1}; EC=4.2.1.46 {ECO:0000313|EMBL:KCZ72084.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1AFC8 related cluster n=1 Tax=unknown RepID=UPI0003D1AFC8
NAD-dependent epimerase/dehydratase
SR-VP_26_10_2019_2_100cm_scaffold_1321_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(22687..23691)
DNA (1005bp) protein (335aa)
dTDP-glucose pyrophosphorylase {ECO:0000313|EMBL:KCZ72085.1}; EC=2.7.7.24 {ECO:0000313|EMBL:KCZ72085.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative glucose-1-phosphate thymidylyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MH38_9EURY
putative glucose-1-phosphate thymidylyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_1321_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(23910..25193)
DNA (1284bp) protein (428aa)
UDP-glucose dehydrogenase (EC:1.1.1.22)
UPI0003D1B5A7 related cluster n=1 Tax=unknown RepID=UPI0003D1B5A7
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1321_24
unknown

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25478..26383
DNA (906bp) protein (302aa)
rRNA biogenesis protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTB9_METHD
rRNA biogenesis protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1321_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(26513..27421)
DNA (909bp) protein (303aa)
Signal peptide peptidase A {ECO:0000313|EMBL:KCZ72880.1}; EC=3.4.21.- {ECO:0000313|EMBL:KCZ72880.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Proteinase IV n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIU4_METAC
Periplasmic serine protease
SR-VP_26_10_2019_2_100cm_scaffold_1321_26
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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27586..28431
DNA (846bp) protein (282aa)
Transposase n=1 Tax=Ferroplasma sp. Type II RepID=T0NGE1_9EURY
Transposase {ECO:0000313|EMBL:EQB74431.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
transposase
Displaying 26 items

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