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SR-VP_26_10_2019_2_100cm_scaffold_784

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_784_1
unknown

Not on your lists

1..108
DNA (108bp) protein (36aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_784_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

452..1780
DNA (1329bp) protein (443aa)
Major facilitator superfamily MFS_1 id=2114319 bin=GWD2_Deltaproteobacteria_55_8 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
sugar phosphate permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
SR-VP_26_10_2019_2_100cm_scaffold_784_3
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1865..2257
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4F4BD
hypothetical protein
Tax=GWC2_Deltaproteobacteria_42_11_curated
SR-VP_26_10_2019_2_100cm_scaffold_784_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2293..3453
DNA (1161bp) protein (387aa)
ABC-type Fe3+ transport system periplasmic component id=2117340 bin=GWD2_Deltaproteobacteria_55_8 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
SR-VP_26_10_2019_2_100cm_scaffold_784_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3483..4847
DNA (1365bp) protein (455aa)
Uncharacterized protein id=2142600 bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
extracellular solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_784_6
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4918..5292)
DNA (375bp) protein (125aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1W5_DESTA
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AFM23556.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
SR-VP_26_10_2019_2_100cm_scaffold_784_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5594..7561
DNA (1968bp) protein (656aa)
Carbohydrate-binding CenC domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RWI4_FERPA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_784_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7569..8027
DNA (459bp) protein (153aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_784_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7987..8823
DNA (837bp) protein (279aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_784_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists


comp(8933..9913)
DNA (981bp) protein (327aa)
Putative diphthamide synthesis protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSS7_METAC
putative diphthamide synthesis protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_784_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9913..10569)
DNA (657bp) protein (219aa)
FtsJ-like methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466Z9_METBF
Putative rRNA methylase {ECO:0000313|EMBL:KCZ70713.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
FtsJ-like methyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_784_trna_1
unknown

Not on your lists

10632..10717
DNA (86bp)
transferRNA Ser
SR-VP_26_10_2019_2_100cm_scaffold_784_12
ACD4, Gracilibacteria, Bacteria

Not on your lists

11387..15550
DNA (4164bp) protein (1388aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI0003769FB6
YD repeat-containing protein
Tax=ACD4
SR-VP_26_10_2019_2_100cm_scaffold_784_13
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15615..19820
DNA (4206bp) protein (1402aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI78_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM07622.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
SR-VP_26_10_2019_2_100cm_scaffold_784_14
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20080..24594
DNA (4515bp) protein (1505aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C71_METBF
serine/threonine kinase
Uncharacterized protein {ECO:0000313|EMBL:AAZ70521.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
SR-VP_26_10_2019_2_100cm_scaffold_784_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24656..25687)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein C3_0040 n=1 Tax=uncultured archaeon RepID=Q2Y4D3_9ARCH
S-layer-related duplication domain {ECO:0000313|EMBL:KCZ70878.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_784_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25684..27222)
DNA (1539bp) protein (513aa)
Pheromone shutdown-related protein TraB {ECO:0000313|EMBL:KCZ71051.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_784_17
unknown

Not on your lists

comp(27297..29861)
DNA (2565bp) protein (855aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_784_18
unknown

Not on your lists

comp(29869..30669)
DNA (801bp) protein (267aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_784_19
unknown

Not on your lists

comp(31103..31351)
DNA (249bp) protein (83aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_784_20
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

31925..32653
DNA (729bp) protein (243aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXD7_METHD
dinuclear metal center protein, YbgI/SA1388 family
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_784_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(32728..34335)
DNA (1608bp) protein (536aa)
Histone acetyltransferase, ELP3 family n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQB1_METZD
histone acetyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_784_22
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(34349..35263)
DNA (915bp) protein (305aa)
Restriction endonuclease n=1 Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QMH3_CYAP0
restriction endonuclease
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
SR-VP_26_10_2019_2_100cm_scaffold_784_23
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35610..35813)
DNA (204bp) protein (68aa)
AsnC family transcriptional regulator n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00035D83E7
AsnC family transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_61_14_curated
SR-VP_26_10_2019_2_100cm_scaffold_784_24
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36105..38195)
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVA3_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SR-VP_26_10_2019_2_100cm_scaffold_784_25
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38281..38580
DNA (300bp) protein (100aa)
Tax=RBG_13_Deltaproteobacteria_61_14_curated
Displaying 26 items

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