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SR-VP_26_10_2019_2_100cm_scaffold_307

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_307_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(290..565)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73620.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_307_2

Not on your lists

817..1248
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037AFA78
Polyketide cyclase/dehydrase
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
SR-VP_26_10_2019_2_100cm_scaffold_307_3
unknown

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1538..3997
DNA (2460bp) protein (820aa)
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase 2 n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PCR6_DEFDS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_307_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4048..4743
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E972_METMS
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_307_trna_1
unknown

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comp(4988..5060)
DNA (73bp)
transferRNA His
SR-VP_26_10_2019_2_100cm_scaffold_307_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5188..5607)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B8W9_METTP
Putative exosome subunit {ECO:0000313|EMBL:KCZ72328.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_307_6
unknown

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comp(5614..5820)
DNA (207bp) protein (69aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_307_7
unknown

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comp(5817..6404)
DNA (588bp) protein (196aa)
50S ribosomal protein L15e n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RL15E_METBU
50S ribosomal protein L15e
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_307_8
unknown

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6635..7201
DNA (567bp) protein (189aa)
TATA-box-binding protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IA61_METCZ
tbpE; TATA-box binding protein (TBP), component of TFIID and TFIIIB
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_307_9
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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comp(7211..7804)
DNA (594bp) protein (198aa)
Hypothetical membrane protein id=2056582 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=CG_Solirubrobact_01
SR-VP_26_10_2019_2_100cm_scaffold_307_10
unknown

Not on your lists

7959..9620
DNA (1662bp) protein (554aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=PUR2_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_307_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9864..10154
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDN6_9EURY
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C
SR-VP_26_10_2019_2_100cm_scaffold_307_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10155..11573
DNA (1419bp) protein (473aa)
UPI0003D1A361 related cluster n=1 Tax=unknown RepID=UPI0003D1A361
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_307_13
unknown

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11573..13009
DNA (1437bp) protein (479aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=GATB_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_307_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13097..14053)
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX20094.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SR-VP_26_10_2019_2_100cm_scaffold_307_15
unknown

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comp(14110..14298)
DNA (189bp) protein (63aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_307_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14541..14771
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILT6_NITGG
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_307_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14774..15073
DNA (300bp) protein (100aa)
Uncharacterized protein id=1977090 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_307_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15254..15874)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEN3_9EURY
Methyltransferase family protein {ECO:0000313|EMBL:KCZ70567.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_307_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15940..17259
DNA (1320bp) protein (440aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KCZ70566.1}; EC=2.7.1.49 {ECO:0000313|EMBL:KCZ70566.1};; EC=2.7.4.7 {ECO:0000313|EMBL:KCZ70566.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12U29_METBU
phosphomethylpyrimidine kinase
SR-VP_26_10_2019_2_100cm_scaffold_307_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17331..18239
DNA (909bp) protein (303aa)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:KCZ70341.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KCZ70341.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
thioredoxin reductase n=1 Tax=Desulfobacter curvatus RepID=UPI00037A590B
thioredoxin reductase (NADPH)
SR-VP_26_10_2019_2_100cm_scaffold_307_21
unknown

Not on your lists

18250..18717
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DA5_METBF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_307_22
unknown

Not on your lists

comp(18718..19062)
DNA (345bp) protein (115aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WNR3_METH6
Ribosomal-protein-alanine acetyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_307_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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19473..20555
DNA (1083bp) protein (361aa)
Probable tRNA pseudouridine synthase D n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=TRUD_METMA
tRNA pseudouridine 13 synthase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_307_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20697..21962
DNA (1266bp) protein (422aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Adenylosuccinate synthetase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MB47_9EURY
adenylosuccinate synthetase
SR-VP_26_10_2019_2_100cm_scaffold_307_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21988..24249
DNA (2262bp) protein (754aa)
Cell division protein FtsH (EC:3.4.24.-)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPU1_METAC
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:KCZ73677.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_307_26
unknown

Not on your lists

24468..25475
DNA (1008bp) protein (336aa)
Pyruvate-formate lyase-activating enzyme n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVF5_METHD
pyruvate-formate lyase-activating enzyme
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_307_27
unknown

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25485..25781
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L079_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_307_28
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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25968..26975
DNA (1008bp) protein (336aa)
id=14424669 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
SR-VP_26_10_2019_2_100cm_scaffold_307_29

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comp(26996..27388)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JDX3_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH36731.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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