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SR-VP_26_10_2019_2_100cm_scaffold_476

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_476_1
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..168)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003755192
Uncharacterized protein {ECO:0000313|EMBL:KFD40651.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_476_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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550..768
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72182.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_476_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

874..1527
DNA (654bp) protein (218aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=KAD_METBF
SR-VP_26_10_2019_2_100cm_scaffold_476_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1604..2200
DNA (597bp) protein (199aa)
Integral membrane protein DUF106 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZS6_METBU
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_476_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2201..2722
DNA (522bp) protein (174aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054803};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00239}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cytidylate kinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MAS8_9EURY
cytidylate kinase
SR-VP_26_10_2019_2_100cm_scaffold_476_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2719..3711
DNA (993bp) protein (331aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Probable tRNA pseudouridine synthase B n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMQ1_METH6
putative tRNA pseudouridine synthase B
SR-VP_26_10_2019_2_100cm_scaffold_476_trna_1
unknown

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3741..3824
DNA (84bp)
transferRNA Ser
SR-VP_26_10_2019_2_100cm_scaffold_476_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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3925..4212
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=2 Tax=environmental samples RepID=Q648X1_9ARCH
Tax=CG_Aenigma_01
SR-VP_26_10_2019_2_100cm_scaffold_476_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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4209..4733
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JCS5_9ARCH
Tax=CG_Aenigma_01
SR-VP_26_10_2019_2_100cm_scaffold_476_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4835..5566
DNA (732bp) protein (244aa)
Cytochrome c-type biogenesis protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AM53_NATGS
thiol:disulfide interchange protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_476_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5882..8218)
DNA (2337bp) protein (779aa)
Cytochrome c-type biogenesis protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XRI7_9EURY
ccmF1; cytochrome c-type biogenesis protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_476_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8220..8693)
DNA (474bp) protein (158aa)
Thioredoxin family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSZ9_NATM8
thioredoxin family protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_476_12
unknown

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comp(8832..10232)
DNA (1401bp) protein (467aa)
4Fe-4S ferredoxin id=14429178 bin=bin3_NC10 species=Deinococcus sp. 2009 genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin3_NC10 organism_group=NC10
iron-sulfur cluster-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_476_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10239..10964)
DNA (726bp) protein (242aa)
Cytochrome c-type biogenesis protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LAC0_9EURY
thiol:disulfide interchange protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_476_14
unknown

Not on your lists

comp(10965..12197)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. JF8 RepID=S5YYK5_9BACI
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_476_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12212..12661)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B6R1_9DELT
putative thioredoxin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_476_16
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12786..13322)
DNA (537bp) protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB24716.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
SR-VP_26_10_2019_2_100cm_scaffold_476_17
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13405..14214)
DNA (810bp) protein (270aa)
Multimeric flavodoxin WrbA-like protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FN39_METHJ
multimeric flavodoxin WrbA-like protein
Tax=BJP_IG2102_Methanoregula_52_95
SR-VP_26_10_2019_2_100cm_scaffold_476_18
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14186..14413)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7D7_METMS
hypothetical protein
Tax=BJP_IG2102_Methanoregula_52_95
SR-VP_26_10_2019_2_100cm_scaffold_476_19
unknown

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comp(14503..16197)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AR0_METBF
B12-binding domain/radical SAM domain protein, family
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_476_20
unknown

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16230..17561
DNA (1332bp) protein (444aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8W4_METEZ
peptidase U62 modulator of DNA gyrase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_476_21
unknown

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comp(17572..18636)
DNA (1065bp) protein (355aa)
myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] id=5240582 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_476_22
unknown

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comp(18682..19251)
DNA (570bp) protein (190aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D3Y8_METSW
CDP-alcohol phosphatidyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_476_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19305..20090)
DNA (786bp) protein (262aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Tryptophan synthase alpha chain n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWM5_METHD
tryptophan synthase, alpha subunit
SR-VP_26_10_2019_2_100cm_scaffold_476_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20087..21274)
DNA (1188bp) protein (396aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
UPI0003D1AF6E related cluster n=1 Tax=unknown RepID=UPI0003D1AF6E
SR-VP_26_10_2019_2_100cm_scaffold_476_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21290..22048)
DNA (759bp) protein (253aa)
Indole-3-glycerol phosphate synthase {ECO:0000313|EMBL:KCZ71184.1}; EC=4.1.1.48 {ECO:0000313|EMBL:KCZ71184.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
UPI0003D19F8B related cluster n=1 Tax=unknown RepID=UPI0003D19F8B
SR-VP_26_10_2019_2_100cm_scaffold_476_26
unknown

Not on your lists

comp(22290..23048)
DNA (759bp) protein (253aa)
tungsten formylmethanofuran dehydrogenase subunit C (EC:1.2.99.5)
Tungsten formylmethanofuran dehydrogenase, subunit C n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVI5_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_476_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23050..24762)
DNA (1713bp) protein (571aa)
Formylmethanofuran dehydrogenase, subunit A {ECO:0000313|EMBL:KCZ72275.1}; EC=1.2.99.5 {ECO:0000313|EMBL:KCZ72275.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Tungsten formylmethanofuran dehydrogenase, subunit A n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WM96_METH6
Tungsten formylmethanofuran dehydrogenase, subunit A
SR-VP_26_10_2019_2_100cm_scaffold_476_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24765..26066)
DNA (1302bp) protein (434aa)
Formylmethanofuran dehydrogenase, subunit B {ECO:0000313|EMBL:KCZ72274.1}; EC=1.2.99.5 {ECO:0000313|EMBL:KCZ72274.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Formylmethanofuran dehydrogenase subunit B n=2 Tax=Methanosarcina mazei RepID=M1PA65_METMZ
Formylmethanofuran dehydrogenase subunit B
SR-VP_26_10_2019_2_100cm_scaffold_476_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26066..26440)
DNA (375bp) protein (125aa)
Formylmethanofuran dehydrogenase subunit D {ECO:0000313|EMBL:KCZ72273.1}; EC=1.2.99.5 {ECO:0000313|EMBL:KCZ72273.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tungsten formylmethanofuran dehydrogenase subunit D (EC:1.2.99.5)
Formylmethanofuran dehydrogenase (Tungsten) subunit D n=2 Tax=Methanosarcina mazei RepID=M1QB19_METMZ
Displaying items 1-30 of 58 in total

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