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SR-VP_26_10_2019_2_100cm_scaffold_4932

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_4932_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(55..2349)
DNA (2295bp) protein (765aa)
Type II secretion system protein E n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6N8_METMS
type II secretion system protein E
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_4932_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2358..3146)
DNA (789bp) protein (263aa)
Site-determining protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6I5_METCZ
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
minD-1; cell division ATPase MinD, archaeal
SR-VP_26_10_2019_2_100cm_scaffold_4932_3
unknown

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comp(3370..4032)
DNA (663bp) protein (221aa)
alpha/beta hydrolase fold protein id=5045814 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4932_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4056..7454)
DNA (3399bp) protein (1133aa)
Signal transduction histidine kinase {ECO:0000313|EMBL:KCZ73158.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Histidine kinase,HAMP domain-containing protein,histidine kinase,cache domain-containing protein,GAF domain-containing protein id=3112752 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. WSM1253 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative two-component sensor histidine kinase
SR-VP_26_10_2019_2_100cm_scaffold_4932_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7451..7816)
DNA (366bp) protein (122aa)
UPI0003D1B816 related cluster n=1 Tax=unknown RepID=UPI0003D1B816
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:KCZ71969.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative response regulator (CheY-like)
SR-VP_26_10_2019_2_100cm_scaffold_4932_6
unknown

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comp(8451..9935)
DNA (1485bp) protein (495aa)
putative circadian clock protein KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNP2_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4932_7
unknown

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comp(10007..10771)
DNA (765bp) protein (255aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B630_METTP
xylose isomerase domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4932_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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11204..11989
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B30604
Pro-Hyp dipeptidase
Tax=RBG_16_Gamma2_60_9_curated
Displaying 8 items

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