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SR-VP_26_10_2019_2_100cm_scaffold_2018

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2018_1
unknown

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1..651
DNA (651bp) protein (217aa)
Prephenate dehydrogenase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MC84_9EURY
prephenate dehydrogenase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_2
unknown

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702..941
DNA (240bp) protein (80aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_3
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(963..2600)
DNA (1638bp) protein (546aa)
Uncharacterized protein {ECO:0000313|EMBL:KKH46814.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2018_trna_1
unknown

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comp(2625..2699)
DNA (75bp)
transferRNA Met
SR-VP_26_10_2019_2_100cm_scaffold_2018_4
unknown

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2945..3988
DNA (1044bp) protein (348aa)
Putative daunorubicin resistance ABC transporter, ATP-binding protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEZ6_9EURY
putative daunorubicin resistance ABC transporter, ATP-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_5
unknown

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3988..4764
DNA (777bp) protein (259aa)
ABC-2 type transporter n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQR9_METZD
ABC-2 type transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4766..5680
DNA (915bp) protein (305aa)
2-phospho-L-lactate transferase {ECO:0000256|HAMAP-Rule:MF_01257}; EC=2.7.8.28 {ECO:0000256|HAMAP-Rule:MF_01257};; LPPG:FO 2-phospho-L-lactate transferase {ECO:0000256|HAMAP-Rule:MF_01257}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
2-phospho-L-lactate transferase n=2 Tax=Methanosarcina acetivorans RepID=COFD_METAC
2-phospho-L-lactate transferase
SR-VP_26_10_2019_2_100cm_scaffold_2018_7
unknown

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comp(5660..5977)
DNA (318bp) protein (106aa)
UPI0003D1A58D related cluster n=1 Tax=unknown RepID=UPI0003D1A58D
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_8
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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6405..7154
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KSC9_ARCVS
hypothetical protein
Tax=GWF2_Lentisphaerae_44_16_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_9
unknown

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7151..7378
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Leptospirillum sp. Group II 'C75' RepID=U4QU49_9BACT
Marine sediment metagenome DNA, contig: S01H1_S42736 {ECO:0000313|EMBL:GAG42012.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2018_10
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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7375..9123
DNA (1749bp) protein (583aa)
Alr1855 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YVW6_NOSS1
hypothetical protein
Tax=GWF2_Lentisphaerae_44_16_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_11
unknown

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9240..9371
DNA (132bp) protein (44aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2018_12
unknown

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9481..10044
DNA (564bp) protein (188aa)
Putative nucleotidyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I429_METCZ
nucleotidyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_13
unknown

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10041..10463
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4A3_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_14
unknown

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comp(10498..11292)
DNA (795bp) protein (265aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11419..11727
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PY45_METTM
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2018_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11724..12461)
DNA (738bp) protein (246aa)
Putative metallo-beta-lactamase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3H4_UNCMA
putative metallo-beta-lactamase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2018_17
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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12653..13531
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YIP9_9DELT
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
SR-VP_26_10_2019_2_100cm_scaffold_2018_18
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

13538..14518
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YIQ0_9DELT
DNA modification methylase
Tax=BJP_IG2158_Nitrospirales_45_240
SR-VP_26_10_2019_2_100cm_scaffold_2018_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14646..16547
DNA (1902bp) protein (634aa)
Molybdopterin molybdochelatase {ECO:0000313|EMBL:KCZ70682.1}; EC=2.10.1.1 {ECO:0000313|EMBL:KCZ70682.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Molybdopterin molybdochelatase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46EY7_METBF
Molybdopterin biosynthesis protein MoeA
SR-VP_26_10_2019_2_100cm_scaffold_2018_20
unknown

Not on your lists

16588..17583
DNA (996bp) protein (332aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_21
unknown

Not on your lists

comp(17757..18041)
DNA (285bp) protein (95aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2018_22
unknown

Not on your lists

18173..18370
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MS84_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18385..19440)
DNA (1056bp) protein (352aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tRNA-splicing endonuclease n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8C2_METEZ
tRNA intron endonuclease
SR-VP_26_10_2019_2_100cm_scaffold_2018_24
unknown

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comp(19456..19803)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYB5_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19860..20168
DNA (309bp) protein (103aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAJ5_METEZ
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
translation initiation factor SUI1
SR-VP_26_10_2019_2_100cm_scaffold_2018_26
unknown

Not on your lists

comp(20300..21127)
DNA (828bp) protein (276aa)
F420-dependent methylenetetrahydromethanopterin dehydrogenase (EC:1.5.98.1)
F420-dependent methylenetetrahydromethanopterin dehydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=MTD_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_27
unknown

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21272..21808
DNA (537bp) protein (179aa)
Methyltransferase type 11 n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T2C4_THEA1
Methyltransferase type 11
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2018_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21849..22181
DNA (333bp) protein (111aa)
FAD synthase {ECO:0000256|HAMAP-Rule:MF_02115, ECO:0000256|SAAS:SAAS00008287}; EC=2.7.7.2 {ECO:0000256|HAMAP-Rule:MF_02115, ECO:0000256|SAAS:SAAS00008290};; FMN adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_02115}; Flavin adenine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_02115}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
FAD synthase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVK4_METHD
cytidyltransferase-related enzyme
Displaying 29 items

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