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SR-VP_26_10_2019_C_20cm_scaffold_15235

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_15235_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2..391
DNA (390bp) protein (130aa)
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:0000256|HAMAP-Rule:MF_00112};; (S)-3-O-geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Phosphoglycerol geranylgeranyltransferase {ECO:0000256|HAMAP-Rule:MF_00112}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGJ8_NITGG
SR-VP_26_10_2019_C_20cm_scaffold_15235_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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412..3927
DNA (3516bp) protein (1172aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
DNA polymerase II large subunit (EC:2.7.7.7)
DNA polymerase II large subunit n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IK45_NITGG
SR-VP_26_10_2019_C_20cm_scaffold_15235_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(3931..5232)
DNA (1302bp) protein (434aa)
glycine/serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=GLYA_CENSY
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_15235_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5335..5550
DNA (216bp) protein (72aa)
Preprotein translocase subunit SecG n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW2_NITGG
secB; protein translocase subunit SecB
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
SR-VP_26_10_2019_C_20cm_scaffold_15235_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5665..7320
DNA (1656bp) protein (552aa)
membrane protein; K08979 putative membrane protein id=14427664 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
membrane protein, PF09843 family
Tax=CSP1_1_Thaumarchaeota
SR-VP_26_10_2019_C_20cm_scaffold_15235_6
unknown

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7332..7883
DNA (552bp) protein (184aa)
tmk; dTMP kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVZ2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL53849.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 6 items

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