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SR-VP_26_10_2019_C_20cm_scaffold_3741

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_3741_1
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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3..542
DNA (540bp) protein (180aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GK4_MESSB
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_3741_2
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(616..1050)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. e14 RepID=D6KEM8_9ACTO
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_3741_3
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1292..1630
DNA (339bp) protein (113aa)
Transcriptional regulator NikR, CopG family n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D597_METSW
CopG family transcriptional regulator
Transcriptional regulator NikR, CopG family {ECO:0000313|EMBL:AEG18205.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_4
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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1803..2870
DNA (1068bp) protein (356aa)
Periplasmic solute binding protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7H6_METB6
periplasmic solute binding protein
Periplasmic solute binding protein {ECO:0000313|EMBL:ABS55687.1}; Flags: Precursor;; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_5
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2874..3692
DNA (819bp) protein (273aa)
ABC transporter related n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7H5_METB6
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABS55686.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_6
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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3689..4573
DNA (885bp) protein (295aa)
ABC-3 protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7H4_METB6
ABC-3 protein
ABC-3 protein {ECO:0000313|EMBL:ABS55685.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_7
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4593..5504)
DNA (912bp) protein (304aa)
HMP/thiamine permease ykoE n=1 Tax=Paenibacillus massiliensis RepID=UPI00036697BF
Uncharacterized protein {ECO:0000313|EMBL:GAK42351.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_3741_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5717..6475
DNA (759bp) protein (253aa)
Acid phosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFS0_9GAMM
Acid phosphatase {ECO:0000313|EMBL:EIL98311.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_9
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(6536..7084)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4N4_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47253.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_10
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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7349..7909
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4N5_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47254.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_11
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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7980..8768
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4N6_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47255.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_12

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8967..11270
DNA (2304bp) protein (768aa)
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:AIF20596.1}; EC=1.1.2.8 {ECO:0000313|EMBL:AIF20596.1};; TaxID=1456345 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_90_H07.;"
quinoprotein alcohol dehydrogenase (EC:1.1.99.8)
Quinoprotein alcohol dehydrogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4G7_9ARCH
SR-VP_26_10_2019_C_20cm_scaffold_3741_13
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(11319..12173)
DNA (855bp) protein (285aa)
Aldo/keto reductase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QRB9_VULDI
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADN50616.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 /; IC-017).;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_14
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(12226..13167)
DNA (942bp) protein (314aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TD62_9CYAN
SAM-dependent methyltransferases {ECO:0000313|EMBL:GAN31859.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
methylase
SR-VP_26_10_2019_C_20cm_scaffold_3741_15
unknown

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13604..14077
DNA (474bp) protein (158aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_3741_16
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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14218..15144
DNA (927bp) protein (309aa)
ABC transporter ATP-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4M9_9ARCH
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAJ47248.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_17
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

15213..15965
DNA (753bp) protein (251aa)
ABC-2 type transport system permease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4M8_9ARCH
ABC-2 type transport system permease
ABC-2 type transport system permease {ECO:0000313|EMBL:BAJ47247.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_18

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16026..18407
DNA (2382bp) protein (794aa)
Alcohol dehydrogenase large subunit {ECO:0000313|EMBL:AIF20592.1}; EC=1.1.2.8 {ECO:0000313|EMBL:AIF20592.1};; TaxID=1456345 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_90_H07.;"
quinoprotein alcohol dehydrogenase (EC:1.1.99.8)
Quinoprotein alcohol dehydrogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4G7_9ARCH
SR-VP_26_10_2019_C_20cm_scaffold_3741_19
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(18570..20045)
DNA (1476bp) protein (492aa)
Multiple sugar ABC transporter substrate-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4N3_9ARCH
multiple sugar ABC transporter substrate-binding protein
Multiple sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAJ47252.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_20
unknown

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comp(20878..21582)
DNA (705bp) protein (235aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_3741_21
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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21759..22631
DNA (873bp) protein (291aa)
Multiple sugar ABC transporter permease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4H1_9ARCH
multiple sugar ABC transporter permease
Multiple sugar ABC transporter permease {ECO:0000313|EMBL:BAJ47190.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
SR-VP_26_10_2019_C_20cm_scaffold_3741_22
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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22628..22930
DNA (303bp) protein (101aa)
Multiple sugar ABC transporter permease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4H0_9ARCH
multiple sugar ABC transporter permease
Multiple sugar ABC transporter permease {ECO:0000313|EMBL:BAJ47189.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
Displaying 22 items

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