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SR-VP_26_10_2019_C_20cm_scaffold_7555

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_7555_1
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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1..144
DNA (144bp) protein (48aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R2A0_SPISS
SR-VP_26_10_2019_C_20cm_scaffold_7555_2
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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362..1162
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4J4_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47213.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
SR-VP_26_10_2019_C_20cm_scaffold_7555_3
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

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comp(1373..1627)
DNA (255bp) protein (85aa)
Putative uncharacterized protein id=4994000 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RBG_13_Chloroflexi_50_21_curated
SR-VP_26_10_2019_C_20cm_scaffold_7555_4
unknown

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2485..2817
DNA (333bp) protein (111aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_7555_5
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2774..3736)
DNA (963bp) protein (321aa)
PP-loop domain-containing protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B8R2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW71840.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
SR-VP_26_10_2019_C_20cm_scaffold_7555_6
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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3832..5151
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-E16 RepID=UPI0003789E32
putative peptidase M50
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_7555_7
unknown

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5192..5521
DNA (330bp) protein (110aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_7555_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5502..6596)
DNA (1095bp) protein (365aa)
pelA; protein pelota (EC:3.1.-.-)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Protein pelota homolog n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVB7_9ARCH
SR-VP_26_10_2019_C_20cm_scaffold_7555_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6607..7875)
DNA (1269bp) protein (423aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
DNA primase DnaG n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC05_NITGG
DNA primase
SR-VP_26_10_2019_C_20cm_scaffold_7555_10
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(7958..8428)
DNA (471bp) protein (157aa)
UPF0292 protein MTH_890 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=Y890_METTH
UPF0292 protein MTH_890 {ECO:0000255|HAMAP-Rule:MF_01095}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 /; JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium; thermoautotrophicum).;"
SR-VP_26_10_2019_C_20cm_scaffold_7555_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8663..10300)
DNA (1638bp) protein (546aa)
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanyl-tRNA synthetase beta subunit {ECO:0000313|EMBL:AIF83482.1}; EC=6.1.1.20 {ECO:0000313|EMBL:AIF83482.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Phenylalanine--tRNA ligase beta chain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INF4_NITGG
SR-VP_26_10_2019_C_20cm_scaffold_7555_12

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comp(10598..12094)
DNA (1497bp) protein (499aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00282};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}; TaxID=1456143 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_40_F03.;"
pheS; phenylalanine--tRNA ligase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha chain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH98_NITGG
SR-VP_26_10_2019_C_20cm_scaffold_7555_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(12101..13108)
DNA (1008bp) protein (336aa)
Tryptophan--tRNA ligase n=1 Tax=Methanobacterium sp. MB1 RepID=U6EE86_9EURY
trpS; tryptophanyl-tRNA synthetase TrpS
Tax=RBG_16_Bathyarchaeota_48_13_curated
Displaying 13 items

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