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SR-VP_26_10_2019_C_20cm_scaffold_4131

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_4131_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(184..1959)
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EB2A2
Uncharacterized protein {ECO:0000313|EMBL:ESW79265.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_4131_trna_1
unknown

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2110..2246
DNA (137bp)
transferRNA Trp
SR-VP_26_10_2019_C_20cm_scaffold_4131_2
unknown

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comp(2295..3152)
DNA (858bp) protein (286aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_4131_3
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(3356..3619)
DNA (264bp) protein (88aa)
TM2 domain containing protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DR76_METV3
hypothetical protein
TM2 domain containing protein {ECO:0000313|EMBL:ADI37353.1}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
SR-VP_26_10_2019_C_20cm_scaffold_4131_4
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

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3709..4290
DNA (582bp) protein (194aa)
DNA-3-methyladenine glycosylase (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LGA8_9BACT
Tax=RBG_16_Zixibacteria_40_9_curated
SR-VP_26_10_2019_C_20cm_scaffold_4131_5
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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4581..6668
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E589_9ARCH
Regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AJM91640.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
SR-VP_26_10_2019_C_20cm_scaffold_4131_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6870..9155
DNA (2286bp) protein (762aa)
nrdJ1; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=14424897 bin=bin1_lowGC species=unknown genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
nrdJ1; ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Tax=CSP1_2_Dadabacteria
SR-VP_26_10_2019_C_20cm_scaffold_4131_7
unknown

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comp(9177..9653)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B62319
SR-VP_26_10_2019_C_20cm_scaffold_4131_8
unknown

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comp(9698..10165)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B62319
SR-VP_26_10_2019_C_20cm_scaffold_4131_9
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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10235..10681
DNA (447bp) protein (149aa)
Uncharacterized protein n=6 Tax=Sulfolobus islandicus RepID=C3NI92_SULIN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP35193.1}; TaxID=429572 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus islandicus (strain L.S.2.15 / Lassen #1).;"
SR-VP_26_10_2019_C_20cm_scaffold_4131_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10704..10967
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVL0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83228.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
SR-VP_26_10_2019_C_20cm_scaffold_4131_11
uncultured marine crenarchaeote HF4000_ANIW137N13, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10972..13002)
DNA (2031bp) protein (677aa)
V-type ATP synthase subunit I (EC:3.6.3.14)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003724DDD
Putative V-type ATPase 116kDa subunit family protein {ECO:0000313|EMBL:ABZ07627.1}; TaxID=455575 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_ANIW137N13.;"
SR-VP_26_10_2019_C_20cm_scaffold_4131_12
unknown

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comp(13012..13338)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-F05 RepID=UPI00037ACC78
SR-VP_26_10_2019_C_20cm_scaffold_4131_13
unknown

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comp(13349..13549)
DNA (201bp) protein (67aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_4131_14
uncultured marine crenarchaeote HF4000_APKG9M20, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13551..14186)
DNA (636bp) protein (212aa)
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=2 Tax=environmental samples RepID=B3TBG5_9ARCH
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=455608 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_APKG9M20.;"
SR-VP_26_10_2019_C_20cm_scaffold_4131_15

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comp(14203..15597)
DNA (1395bp) protein (465aa)
V-type ATP synthase subunit B (EC:3.6.3.14)
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00036489B4
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1502290 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-D07.;"
SR-VP_26_10_2019_C_20cm_scaffold_4131_16
unknown

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comp(15598..17370)
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035D98F1
Uncharacterized protein {ECO:0000313|EMBL:KKM75812.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_4131_17

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comp(17372..17713)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003663988
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1456080 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_191_E02.;"
V-type ATP synthase subunit F
SR-VP_26_10_2019_C_20cm_scaffold_4131_18

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comp(17717..18781)
DNA (1065bp) protein (355aa)
V-type ATP synthase subunit C (EC:3.6.3.14)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003681B94
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1456393 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_20_C01.;"
SR-VP_26_10_2019_C_20cm_scaffold_4131_19

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comp(18788..19348)
DNA (561bp) protein (187aa)
Putative ATP synthase (E/31 kDa) subunit n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97J3 RepID=B3T378_9ARCH
V-type ATP synthase subunit E {ECO:0000313|EMBL:AIF04680.1}; TaxID=1456056 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_175_G11.;"
SR-VP_26_10_2019_C_20cm_scaffold_4131_20
uncultured marine crenarchaeote HF4000_ANIW97J3, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(19364..19588)
DNA (225bp) protein (75aa)
H+ ATPase subunit K (EC:3.6.3.15)
ATPase n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003779C5F
Putative ATP synthase subunit C {ECO:0000313|EMBL:ABZ07038.1}; TaxID=455567 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_ANIW97J3.;"
SR-VP_26_10_2019_C_20cm_scaffold_4131_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(19664..19996)
DNA (333bp) protein (111aa)
Nascent polypeptide-associated complex protein n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=NAC_PICTO
nac; nascent polypeptide-associated complex protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_4131_22
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(20534..21001)
DNA (468bp) protein (156aa)
Putative PUA domain protein n=2 Tax=environmental samples RepID=B3T7T9_9ARCH
putative PUA domain protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_4131_23
unknown

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21145..21240
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 24 items

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