ggKbase home page

SR-VP_26_10_2019_C_20cm_scaffold_17048

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_17048_1
unknown

Not on your lists

comp(107..1585)
DNA (1479bp) protein (493aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL53028.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
FdrA family protein; K02381 FdrA protein id=24505200 bin=RBG_19FT_COMBO_GAL15_69_19 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
succinyl-CoA synthetase subunit alpha
SR-VP_26_10_2019_C_20cm_scaffold_17048_2
unknown

Not on your lists

comp(1582..2580)
DNA (999bp) protein (333aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM60707.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=24480317 bin=RBG_19FT_COMBO_GAL15_69_19 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_17048_3
unknown

Not on your lists

comp(2577..4124)
DNA (1548bp) protein (516aa)
hor:Hore_08780 ABC transporter-like protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] id=1245997 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Uncharacterized protein {ECO:0000313|EMBL:KKL72481.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter ATP-binding protein
SR-VP_26_10_2019_C_20cm_scaffold_17048_4
unknown

Not on your lists

comp(4185..5255)
DNA (1071bp) protein (357aa)
Basic membrane lipoprotein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPX2_ARCVS
Uncharacterized protein {ECO:0000313|EMBL:KKM62584.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative ABC-type transport system, periplasmic component/surface lipoprotein
SR-VP_26_10_2019_C_20cm_scaffold_17048_5
unknown

Not on your lists

comp(5393..6343)
DNA (951bp) protein (317aa)
Nucleoside ABC transporter membrane protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J867_DESRM
Uncharacterized protein {ECO:0000313|EMBL:KKM88531.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
inner-membrane translocator
SR-VP_26_10_2019_C_20cm_scaffold_17048_6
unknown

Not on your lists

comp(6349..7296)
DNA (948bp) protein (316aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM96240.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein id=1245658 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ABC transporter permease
Displaying 6 items

View Taxonomy