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SR-VP_26_10_2019_C_40cm_scaffold_448

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_448_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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62..595
DNA (534bp) protein (178aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027Q7_SOLUE
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ABJ82750.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR-VP_26_10_2019_C_40cm_scaffold_448_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1149..2174
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027Q6_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82751.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR-VP_26_10_2019_C_40cm_scaffold_448_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2595..4109
DNA (1515bp) protein (505aa)
Hydrogenase, membrane subunit 4-like protein (HycC-like) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2B5_UNCMA
hydrogenase, membrane subunit 4-like protein (HycC-like)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_448_4
unknown

Not on your lists

4304..6319
DNA (2016bp) protein (672aa)
Hydrogenase, membrane subunit 4-like protein (HycC-like) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2B5_UNCMA
hydrogenase, membrane subunit 4-like protein (HycC-like)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_448_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6319..7266
DNA (948bp) protein (316aa)
Formate hydrogenlyase subunit 4 n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y2T3_9FIRM
respiratory-chain NADH dehydrogenase subunit 1
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_448_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7270..7929
DNA (660bp) protein (220aa)
Hydrogenase, membrane subunit 2-like protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2B7_UNCMA
Hydrogenase 4 membrane component (E) {ECO:0000313|EMBL:KCZ70699.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hydrogenase, membrane subunit 2-like protein
SR-VP_26_10_2019_C_40cm_scaffold_448_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7934..9388
DNA (1455bp) protein (485aa)
Hydrogenase, membrane subunit 1-like protein (EchA-like) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2B8_UNCMA
hydrogenase, membrane subunit 1-like protein (EchA-like)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_448_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9393..10985
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036597A3
hydrogenase, large subunit-like protein (HycE-like)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_448_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10994..11332
DNA (339bp) protein (113aa)
NADH dehydrogenase subunit I n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RGG5_MOOTA
NADH:ubiquinone oxidoreductase chain I-like protein {ECO:0000313|EMBL:KCZ70696.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
formate hydrogenlyase complex iron-sulfur subunit
SR-VP_26_10_2019_C_40cm_scaffold_448_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11329..11817
DNA (489bp) protein (163aa)
Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA
Ni,Fe-hydrogenase III small subunit {ECO:0000313|EMBL:KCZ70695.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ni,Fe-hydrogenase III small subunit
SR-VP_26_10_2019_C_40cm_scaffold_448_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11814..12248
DNA (435bp) protein (145aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_448_12
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12279..12650
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9I5_9ARCH
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_44_11_curated
SR-VP_26_10_2019_C_40cm_scaffold_448_13
RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated, Saganbacteria, Bacteria

Not on your lists

12638..12871
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KC10_NITWC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
SR-VP_26_10_2019_C_40cm_scaffold_448_14
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13119..16409)
DNA (3291bp) protein (1097aa)
APHP domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBW7_METEZ
APHP domain-containing protein
APHP domain protein {ECO:0000313|EMBL:ADI75089.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
SR-VP_26_10_2019_C_40cm_scaffold_448_15
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16425..16883)
DNA (459bp) protein (153aa)
WD40-like Beta Propeller n=1 Tax=Bacillus cereus R309803 RepID=C2Q875_BACCE
tolB protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
SR-VP_26_10_2019_C_40cm_scaffold_448_16
unknown

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17005..17211
DNA (207bp) protein (69aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_448_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17529..19013)
DNA (1485bp) protein (495aa)
UPI0003D1A578 related cluster n=1 Tax=unknown RepID=UPI0003D1A578
preprotein translocase subunit SecY
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_448_18
unknown

Not on your lists


comp(19019..19474)
DNA (456bp) protein (152aa)
50S ribosomal protein L15P n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=RL15_METAC
rpl15p; 50S ribosomal protein L15
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_448_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(19480..19941)
DNA (462bp) protein (154aa)
50S ribosomal protein L30P n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAK1_METCZ
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rpl30p; 50S ribosomal protein L30
SR-VP_26_10_2019_C_40cm_scaffold_448_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(19942..20565)
DNA (624bp) protein (208aa)
30S ribosomal protein S5 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RS5_METBU
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps5p; 30S ribosomal protein S5P
SR-VP_26_10_2019_C_40cm_scaffold_448_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(20570..21088)
DNA (519bp) protein (173aa)
50S ribosomal protein L18P n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMQ8_METH6
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L18
SR-VP_26_10_2019_C_40cm_scaffold_448_22
unknown

Not on your lists

comp(21094..21540)
DNA (447bp) protein (149aa)
50S ribosomal protein L19e n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6Q9_METMS
50S ribosomal protein L19E
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_448_23
unknown

Not on your lists

comp(21542..22189)
DNA (648bp) protein (216aa)
50S ribosomal protein L32e n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JJ02_NATP1
ribosomal protein L32E
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_448_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(22195..22725)
DNA (531bp) protein (177aa)
50S ribosomal protein L6 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1A4_METHD
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
archaeal ribosomal protein L6P
SR-VP_26_10_2019_C_40cm_scaffold_448_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(22735..23124)
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=RS8_METTP
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps8p; 30S ribosomal protein S8P
SR-VP_26_10_2019_C_40cm_scaffold_448_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(23134..23286)
DNA (153bp) protein (51aa)
30S ribosomal protein S14 type Z n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAJ4_METCZ
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps14p; 30S ribosomal protein S14
SR-VP_26_10_2019_C_40cm_scaffold_448_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(23287..23793)
DNA (507bp) protein (169aa)
UPI0003D1A292 related cluster n=1 Tax=unknown RepID=UPI0003D1A292
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L5
SR-VP_26_10_2019_C_40cm_scaffold_448_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23794..24486)
DNA (693bp) protein (231aa)
30S ribosomal protein S4e n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=RS4E_METBF
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SSU ribosomal protein S4E
SR-VP_26_10_2019_C_40cm_scaffold_448_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(24489..24758)
DNA (270bp) protein (90aa)
50S ribosomal protein L24P n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=RL24_METBF
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
LSU ribosomal protein L26e (L24p)
SR-VP_26_10_2019_C_40cm_scaffold_448_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(24840..25238)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMQ3_METZD
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L14
Displaying items 1-30 of 98 in total

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