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SR-VP_26_10_2019_C_40cm_scaffold_752

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_752_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1..2208)
DNA (2208bp) protein (736aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
SR-VP_26_10_2019_C_40cm_scaffold_752_2
unknown

Not on your lists

comp(2585..2815)
DNA (231bp) protein (77aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_752_3
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2993..4717)
DNA (1725bp) protein (575aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518};; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=ADEC_METBU
SR-VP_26_10_2019_C_40cm_scaffold_752_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4830..5114
DNA (285bp) protein (95aa)
GYD family protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL31_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ71666.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
GYD family protein
SR-VP_26_10_2019_C_40cm_scaffold_752_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5533..6570
DNA (1038bp) protein (346aa)
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:KCZ71465.1}; EC=2.3.1.- {ECO:0000313|EMBL:KCZ71465.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Poly(R)-hydroxyalkanoic acid synthase subunit PhaC n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WWU5_9EURY
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
SR-VP_26_10_2019_C_40cm_scaffold_752_6
unknown

Not on your lists

comp(6635..7024)
DNA (390bp) protein (130aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_752_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7091..7522
DNA (432bp) protein (144aa)
histidine kinase n=1 Tax=cyanobacterium PCC 7702 RepID=UPI000374D744
PAS domain S-box {ECO:0000313|EMBL:KCZ71183.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
multi-sensor hybrid histidine kinase
SR-VP_26_10_2019_C_40cm_scaffold_752_8
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

8016..9125
DNA (1110bp) protein (370aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1M8_FERPA
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
SR-VP_26_10_2019_C_40cm_scaffold_752_9
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

9122..10033
DNA (912bp) protein (304aa)
Oxidoreductase domain protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B959_METTP
oxidoreductase domain-containing protein
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
SR-VP_26_10_2019_C_40cm_scaffold_752_10
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

10030..10614
DNA (585bp) protein (195aa)
Carbonic anhydrases/acetyltransferases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D5A7_PELTS
carbonic anhydrases/acetyltransferases
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
SR-VP_26_10_2019_C_40cm_scaffold_752_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10556..12070
DNA (1515bp) protein (505aa)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:KCZ72201.1}; EC=1.1.1.336 {ECO:0000313|EMBL:KCZ72201.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UDP-glucose dehydrogenase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PWH4_METMZ
UDP-glucose dehydrogenase
SR-VP_26_10_2019_C_40cm_scaffold_752_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12229..13374
DNA (1146bp) protein (382aa)
Arylsulfatase regulator n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TKS9_METAC
Putative peptide-modifying radical SAM enzyme, Mhun_1560 family {ECO:0000313|EMBL:KCZ72679.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
atsB; arylsulfatase
SR-VP_26_10_2019_C_40cm_scaffold_752_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13478..14194
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73182.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_752_14

Not on your lists

comp(14449..14871)
DNA (423bp) protein (141aa)
Putative uncharacterized protein id=3110653 bin=GWF2_Geobacter_54_21 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
SR-VP_26_10_2019_C_40cm_scaffold_752_15
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(14864..15133)
DNA (270bp) protein (90aa)
Uncharacterized protein id=4791431 bin=GWC2_Geobacteraceae_55_20 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=CG_Elusi_05
SR-VP_26_10_2019_C_40cm_scaffold_752_16
unknown

Not on your lists

15489..16238
DNA (750bp) protein (250aa)
Hypothetical DUF75 protein n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L213_PICTO
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_752_17
unknown

Not on your lists

16314..16475
DNA (162bp) protein (54aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_752_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16548..17720)
DNA (1173bp) protein (391aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Argininosuccinate synthase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MIX8_9EURY
argininosuccinate synthase
SR-VP_26_10_2019_C_40cm_scaffold_752_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17968..18843)
DNA (876bp) protein (292aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SN24_9CHLR
succinyl-CoA synthetase subunit alpha
SR-VP_26_10_2019_C_40cm_scaffold_752_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18818..19924)
DNA (1107bp) protein (369aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
sucC; succinyl-CoA synthetase beta chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MXK3_ANATU
SR-VP_26_10_2019_C_40cm_scaffold_752_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20008..20943
DNA (936bp) protein (312aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ornithine carbamoyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MAM8_9EURY
ornithine carbamoyltransferase
SR-VP_26_10_2019_C_40cm_scaffold_752_22
unknown

Not on your lists

21068..21259
DNA (192bp) protein (64aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_752_trna_1
unknown

Not on your lists

21084..21168
DNA (85bp)
transferRNA Leu
SR-VP_26_10_2019_C_40cm_scaffold_752_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21334..22842
DNA (1509bp) protein (503aa)
Seryl-tRNA synthetase {ECO:0000313|EMBL:KCZ70477.1}; EC=6.1.1.11 {ECO:0000313|EMBL:KCZ70477.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
serine--tRNA ligase (EC:6.1.1.11)
Type-2 serine--tRNA ligase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6B6_METEZ
SR-VP_26_10_2019_C_40cm_scaffold_752_24
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22895..24376
DNA (1482bp) protein (494aa)
Aldehyde dehydrogenase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q5V7_METMZ
Aldehyde dehydrogenase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_752_25
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24385..25665
DNA (1281bp) protein (427aa)
Class III aminotransferase n=1 Tax=uncultured archaeon RepID=D1JBI7_9ARCH
4-aminobutyrate aminotransferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_752_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25726..26286
DNA (561bp) protein (187aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=uncultured archaeon RepID=D1JCI3_9ARCH
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_752_27
unknown

Not on your lists

comp(26270..26743)
DNA (474bp) protein (158aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_752_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26911..27279
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72089.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_752_29
unknown

Not on your lists

27379..28554
DNA (1176bp) protein (392aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXR1_METHD
putative homoserine kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 60 in total

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