ggKbase home page

SR-VP_26_10_2020_1_100CM_scaffold_2208972

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_2208972_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(291..566)
DNA (276bp) protein (92aa)
hypothetical protein
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WX2_METBU
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2208972_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(557..1546)
DNA (990bp) protein (330aa)
CRISPR-associated Cas1 family protein
CRISPR-associated endonuclease Cas1 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WX3_METBU
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2208972_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1543..2109)
DNA (567bp) protein (189aa)
CRISPR-associated Cas4 family protein
CRISPR-associated protein Cas4 containing DUF83 domain n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WX4_METBU
CRISPR-associated exonuclease, Cas4 family {ECO:0000313|EMBL:KCZ73496.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2208972_4
unknown

Not on your lists

comp(2106..2516)
DNA (411bp) protein (137aa)
hypothetical protein
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036E90B5
Marine sediment metagenome DNA, contig: S06H3_C02390 {ECO:0000313|EMBL:GAH91465.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2020_1_100CM_scaffold_2208972_5
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(2513..3112)
DNA (600bp) protein (200aa)
hypothetical protein
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371C2EC
Tax=CG_Elusi_02
SR-VP_26_10_2020_1_100CM_scaffold_2208972_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3328..3645)
DNA (318bp) protein (106aa)
putative nucleic acid-binding protein, contains PIN domain
Uncharacterized protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8N944_9CYAN
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:KCZ73499.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2208972_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3742..3990)
DNA (249bp) protein (83aa)
hypothetical protein
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002FBD902
Uncharacterized protein {ECO:0000313|EMBL:KCZ73501.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2208972_8
unknown

Not on your lists

comp(4241..4435)
DNA (195bp) protein (65aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_2208972_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4432..4734)
DNA (303bp) protein (101aa)
acylphosphatase
Acylphosphatase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BDT7_METIK
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_2208972_10
unknown

Not on your lists

comp(5023..5142)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 10 items

View Taxonomy