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SR-VP_26_10_2020_1_100CM_scaffold_6856300

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_6856300_1
unknown

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31..522
DNA (492bp) protein (164aa)
PUA domain containing protein
Prefoldin molecular chaperone n=1 Tax=uncultured archaeon GZfos26E7 RepID=Q64C00_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(527..1858)
DNA (1332bp) protein (444aa)
Cobalt ABC transporter, ATP-binding protein
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WNP9_METH6
Cobalt transport protein ATP-binding subunit {ECO:0000313|EMBL:KCZ73111.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1865..2704)
DNA (840bp) protein (280aa)
cobalt ABC transporter, inner membrane subunit CbiQ
Cobalt ABC transporter permease component n=1 Tax=planctomycete KSU-1 RepID=I3INN8_9PLAN
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:KCZ73112.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2704..3618)
DNA (915bp) protein (305aa)
ABC-type Co2+ transport system, permease component
Cobalt transport protein CbiM n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D412_DESAJ
ABC-type Co2+ transport system, permease component {ECO:0000313|EMBL:KCZ73113.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3694..3933)
DNA (240bp) protein (80aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM4_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ72711.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3981..4562)
DNA (582bp) protein (194aa)
ruvA; holliday junction DNA helicase RuvA
Holliday junction DNA helicase RuvA n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LKI0_METBM
Holliday junction DNA helicase subunit RuvA {ECO:0000313|EMBL:KCZ73525.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KCZ73525.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4566..5036)
DNA (471bp) protein (157aa)
ruvC; Holliday junction resolvase
Crossover junction endodeoxyribonuclease ruvC n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L158_9EURY
Holliday junction endonuclease RuvC {ECO:0000313|EMBL:KCZ73526.1}; EC=3.1.22.4 {ECO:0000313|EMBL:KCZ73526.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5107..5511)
DNA (405bp) protein (135aa)
molybdopterin dinucleotide-binding region
Molybdopterin dinucleotide-binding region n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9L5_METEZ
Formylmethanofuran dehydrogenase subunit D {ECO:0000313|EMBL:KCZ71884.1}; EC=1.2.99.5 {ECO:0000313|EMBL:KCZ71884.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_9
unknown

Not on your lists

comp(5511..6722)
DNA (1212bp) protein (404aa)
formylmethanofuran dehydrogenase, subunit B
UPI0003D1A226 related cluster n=1 Tax=unknown RepID=UPI0003D1A226
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_10
unknown

Not on your lists

comp(6732..7190)
DNA (459bp) protein (153aa)
formylmethanofuran dehydrogenase, subunit G (EC:1.2.99.5)
Formylmethanofuran dehydrogenase, subunit G n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBC1_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_11
unknown

Not on your lists

7802..8320
DNA (519bp) protein (173aa)
hypothetical protein
UPI0003D1C5B2 related cluster n=1 Tax=unknown RepID=UPI0003D1C5B2
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_12
unknown

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8346..8765
DNA (420bp) protein (140aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IA93_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_13
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8758..9462)
DNA (705bp) protein (235aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYG4_METHD
Uncharacterized protein {ECO:0000313|EMBL:AGB50492.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_14

Not on your lists

comp(9973..11829)
DNA (1857bp) protein (619aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W038_UNCMA
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_15
unknown

Not on your lists

comp(11834..14824)
DNA (2991bp) protein (997aa)
microbial collagenase
UPI0003D1B3C3 related cluster n=1 Tax=unknown RepID=UPI0003D1B3C3
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_16
unknown

Not on your lists

comp(14861..15238)
DNA (378bp) protein (126aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_6856300_17
unknown

Not on your lists

comp(15219..15818)
DNA (600bp) protein (200aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_6856300_18
unknown

Not on your lists

16122..17387
DNA (1266bp) protein (422aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTV7_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_19
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17742..19541)
DNA (1800bp) protein (600aa)
hypothetical protein
Putative uncharacterized protein C1_0040 n=1 Tax=uncultured archaeon RepID=Q2VP49_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AKB78412.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_20
unknown

Not on your lists

comp(19617..20852)
DNA (1236bp) protein (412aa)
NAD-dependent malic enzyme (EC:1.1.1.38)
NAD-dependent malic enzyme n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BW67_METCG
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20852..21523)
DNA (672bp) protein (224aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6L7_METTP
Uncharacterized protein {ECO:0000313|EMBL:KCZ73240.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_22
unknown

Not on your lists

comp(21689..22276)
DNA (588bp) protein (196aa)
iron-sulfur flavoprotein
Iron-sulfur flavoprotein n=2 Tax=Methanosarcina mazei RepID=M1P966_METMZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_23
unknown

Not on your lists

22464..22958
DNA (495bp) protein (165aa)
phage shock protein C
Phage shock protein C, PspC n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EA24_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_24
unknown

Not on your lists

22962..23651
DNA (690bp) protein (230aa)
pentapeptide repeat-containing protein
Pentapeptide repeat protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN74_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6856300_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23893..26109)
DNA (2217bp) protein (739aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0H977_METFS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71770.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6856300_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26156..26287)
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71770.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying 26 items

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