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SR-VP_26_10_2020_1_100CM_scaffold_1805019

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_1805019_1
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(76..1566)
DNA (1491bp) protein (497aa)
hypothetical protein
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037412FA
Phage tail protein {ECO:0000313|EMBL:KEQ26410.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_2
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1748..2326)
DNA (579bp) protein (193aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYS6_METHD
Uncharacterized protein {ECO:0000313|EMBL:AGB49820.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_3
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2328..2903)
DNA (576bp) protein (192aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2G254_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGW36038.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2896..5055)
DNA (2160bp) protein (720aa)
AAA+ family ATPase
AAA+ family ATPase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWL7_METHD
AAA+ family ATPase {ECO:0000313|EMBL:KCZ70560.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_5

Not on your lists

comp(5649..6425)
DNA (777bp) protein (259aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE97951.1}; TaxID=1455961 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_03_F11.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6929..7192
DNA (264bp) protein (88aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_1805019_7
unknown

Not on your lists

comp(7260..7442)
DNA (183bp) protein (61aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_1805019_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8058..9404
DNA (1347bp) protein (449aa)
cytochrome c family protein
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3K7_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KCZ70799.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_9
unknown

Not on your lists

comp(9598..10434)
DNA (837bp) protein (279aa)
integrase family protein
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003722246
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1805019_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11155..11586
DNA (432bp) protein (144aa)
copper binding protein
Blue (Type 1) copper domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TN01_9CHLR
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_1805019_11
unknown

Not on your lists

comp(11679..12872)
DNA (1194bp) protein (398aa)
beta-lactamase domain-containing protein
Putative flavoprotein n=1 Tax=uncultured archaeon RepID=Q2Y4G2_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1805019_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12992..13645)
DNA (654bp) protein (218aa)
AcdB acetate--coA ligase (ADP-forming) subunit beta
AcdB acetate--coA ligase (ADP-forming) , beta chain n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AFX9_PYRYC
ATP-grasp domain protein {ECO:0000313|EMBL:KCZ72378.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13642..15036)
DNA (1395bp) protein (465aa)
acdA; acetyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.13)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64CM7_9ARCH
Acetyl-CoA synthetase (ADP-forming) alpha subunit {ECO:0000313|EMBL:KCZ72377.1}; EC=6.2.1.13 {ECO:0000313|EMBL:KCZ72377.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_14
unknown

Not on your lists

comp(15036..16145)
DNA (1110bp) protein (370aa)
glutamate dehydrogenase/leucine dehydrogenase
Glutamate dehydrogenase (NAD(P)+) n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64CM6_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1805019_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16266..16625)
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72071.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16656..16847)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72072.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_17
unknown

Not on your lists

comp(16941..17066)
DNA (126bp) protein (42aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_1805019_trna_2
unknown

Not on your lists

comp(17124..17195)
DNA (72bp)
transferRNA Ala
SR-VP_26_10_2020_1_100CM_scaffold_1805019_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17222..17602)
DNA (381bp) protein (127aa)
translation elongation factor aEF-1 beta
Elongation factor 1-beta n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPM5_METZD
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_19
unknown

Not on your lists

comp(17716..18315)
DNA (600bp) protein (200aa)
kinase
Putative archaeal kinase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I4F5_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1805019_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18431..18835)
DNA (405bp) protein (135aa)
signal transduction protein with CBS domains
Putative signal transduction protein with CBS domains n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E881_METMS
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ73607.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_trna_1
unknown

Not on your lists

comp(19093..19175)
DNA (83bp)
transferRNA Leu
SR-VP_26_10_2020_1_100CM_scaffold_1805019_21
unknown

Not on your lists


19325..19906
DNA (582bp) protein (194aa)
rpsC; 30S ribosomal protein S3Ae
30S ribosomal protein S3Ae n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BW87_METCG
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1805019_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20101..20844)
DNA (744bp) protein (248aa)
putative methyltransferase
Putative methyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MRF9_9EURY
tRNA(1-methyladenosine) methyltransferase-like methyltransferase {ECO:0000313|EMBL:KCZ73511.1}; EC=2.1.1.219 {ECO:0000313|EMBL:KCZ73511.1};; EC=2.1.1.220 {ECO:0000313|EMBL:KCZ73511.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_23
unknown

Not on your lists

20899..21264
DNA (366bp) protein (122aa)
hypothetical protein
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVB8_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1805019_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21456..22349
DNA (894bp) protein (298aa)
circadian clock protein KaiC
Putative circadian clock protein, KaiC n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RHU7_ARCPA
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:KCZ72756.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22333..22686
DNA (354bp) protein (118aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNA8_ARCVS
Uncharacterized protein {ECO:0000313|EMBL:KCZ72755.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22971..24197
DNA (1227bp) protein (409aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BJ70_9EURY
FIST domain-containing protein {ECO:0000313|EMBL:KCZ72499.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1805019_27
unknown

Not on your lists

comp(24194..25126)
DNA (933bp) protein (311aa)
UbiA prenyltransferase
UbiA prenyltransferase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNA6_ARCVS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1805019_28
unknown

Not on your lists

25313..25570
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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