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SR-VP_26_10_2020_1_100CM_scaffold_938766

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_938766_trna_1
unknown

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215..327
DNA (113bp)
transferRNA Gly
SR-VP_26_10_2020_1_100CM_scaffold_938766_1
unknown

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512..1984
DNA (1473bp) protein (491aa)
UDP-glucose dehydrogenase
UDP-glucose dehydrogenase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PWH4_METMZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_938766_2
unknown

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comp(1977..2921)
DNA (945bp) protein (315aa)
Myo-inositol 2-dehydrogenase
Myo-inositol 2-dehydrogenase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DD6_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_938766_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3062..4147)
DNA (1086bp) protein (362aa)
putative aminotransferase
Putative aminotransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ6_METPS
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:KCZ72825.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_938766_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4279..5259)
DNA (981bp) protein (327aa)
UDP-N-acetylglucosamine-1-phosphate transferase
UPI0003D1A976 related cluster n=1 Tax=unknown RepID=UPI0003D1A976
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:KCZ72827.1}; EC=2.7.8.15 {ECO:0000313|EMBL:KCZ72827.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_938766_5
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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comp(5712..8801)
DNA (3090bp) protein (1030aa)
hypothetical protein
Peptidase S8 and S53 subtilisin kexin sedolisin n=2 Tax=Streptomyces RepID=D1WTT1_9ACTO id=43301 bin=ACD38 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKQ85234.1}; TaxID=1618433 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
SR-VP_26_10_2020_1_100CM_scaffold_938766_6
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8934..9497)
DNA (564bp) protein (188aa)
hypothetical protein
UPI0003D1A833 related cluster n=1 Tax=unknown RepID=UPI0003D1A833
Uncharacterized protein {ECO:0000313|EMBL:ETA67489.1}; Flags: Precursor;; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
SR-VP_26_10_2020_1_100CM_scaffold_938766_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9769..13191
DNA (3423bp) protein (1141aa)
hypothetical protein
Protein containing DUF1616 and fibronectin type III-like domains n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XZ6_METBU
Putative membrane protein {ECO:0000313|EMBL:KCZ71155.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_938766_8
unknown

Not on your lists

13266..13835
DNA (570bp) protein (190aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EA95_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_938766_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13921..15696
DNA (1776bp) protein (592aa)
excinuclease ABC subunit C
UvrABC system protein C n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBR0_METEZ
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_938766_10
unknown

Not on your lists

15735..15908
DNA (174bp) protein (58aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_938766_11
unknown

Not on your lists

15932..16906
DNA (975bp) protein (325aa)
radical SAM protein
Radical SAM domain protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAL9_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_938766_12
unknown

Not on your lists

16915..17319
DNA (405bp) protein (135aa)
Mov34/MPN/PAD-1 family protein
Mov34/MPN/PAD-1 family protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAL8_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_938766_13
unknown

Not on your lists

17387..18562
DNA (1176bp) protein (392aa)
nucleotidyl transferase
Mannose-1-phosphate guanyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TW4_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_938766_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18559..19317)
DNA (759bp) protein (253aa)
ribose-5-phosphate isomerase
Ribose-5-phosphate isomerase A n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M6Y4_9EURY
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_938766_15
unknown

Not on your lists

19404..20549
DNA (1146bp) protein (382aa)
dys1; deoxyhypusine synthase (EC:2.5.1.46)
Putative deoxyhypusine synthase n=1 Tax=uncultured crenarchaeote RepID=Q701Z9_9CREN
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_938766_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20563..20985)
DNA (423bp) protein (141aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WG0_METBU
Uncharacterized protein {ECO:0000313|EMBL:KCZ70690.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_938766_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21075..21491)
DNA (417bp) protein (139aa)
hypothetical protein
UPI0003D1A54D related cluster n=1 Tax=unknown RepID=UPI0003D1A54D
Uncharacterized protein {ECO:0000313|EMBL:KCZ70689.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_938766_18
unknown

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comp(22012..22122)
DNA (111bp) protein (37aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_938766_19
unknown

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22361..22699
DNA (339bp) protein (113aa)

This feature has no annotations

Displaying 20 items

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