ggKbase home page

SR-VP_26_10_2020_1_100CM_scaffold_3356875

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_3356875_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1..1305
DNA (1305bp) protein (435aa)
methyl-viologen-reducing hydrogenase, delta subunit
CoB--CoM heterodisulfide reductase subunit A n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9H2_METTP
Polyferredoxin, heterodixulfide reductase subunit A {ECO:0000313|EMBL:KCZ72580.1}; EC=1.8.98.1 {ECO:0000313|EMBL:KCZ72580.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3356875_2
unknown

Not on your lists

1310..2626
DNA (1317bp) protein (439aa)
4Fe-4S ferredoxin
UPI0003D1AE8E related cluster n=1 Tax=unknown RepID=UPI0003D1AE8E
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3356875_3
unknown

Not on your lists

2741..3124
DNA (384bp) protein (128aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3356875_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3153..5195)
DNA (2043bp) protein (681aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9A2_METCZ
Ribonucleoside-diphosphate reductase class II {ECO:0000313|EMBL:KCZ72793.1}; EC=1.17.4.- {ECO:0000313|EMBL:KCZ72793.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3356875_5
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5192..5467)
DNA (276bp) protein (92aa)
FtrB
UPI0003D1BB27 related cluster n=1 Tax=unknown RepID=UPI0003D1BB27
Ferredoxin-thioredoxin reductase, catalytic subunit {ECO:0000313|EMBL:ETA67751.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
SR-VP_26_10_2020_1_100CM_scaffold_3356875_6

Not on your lists

comp(5460..5891)
DNA (432bp) protein (144aa)
beta-lactamase domain-containing protein
Putative flavodoxin n=1 Tax=uncultured archaeon RepID=D1JAS6_9ARCH
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
SR-VP_26_10_2020_1_100CM_scaffold_3356875_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6214..6729
DNA (516bp) protein (172aa)
nitroreductase
Nitroreductase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B948_METTP
Nitroreductase {ECO:0000313|EMBL:KCZ71250.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3356875_8
unknown

Not on your lists

6726..7913
DNA (1188bp) protein (396aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAN7_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3356875_9
unknown

Not on your lists

comp(8045..8506)
DNA (462bp) protein (154aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3356875_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8741..9373)
DNA (633bp) protein (211aa)
methyltransferase type 12
Methyltransferase type 12 id=2241978 bin=GWB2_Chloroflexi_49_20 species=Guillardia theta genus=Guillardia taxon_order=Pyrenomonadales taxon_class=Cryptophyta phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_13_Bathyarchaeota_38_9_curated
SR-VP_26_10_2020_1_100CM_scaffold_3356875_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9796..11343
DNA (1548bp) protein (516aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
N-6 DNA methylase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFG8_9CHLR
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:KCZ72007.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KCZ72007.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3356875_12
unknown

Not on your lists

11486..11626
DNA (141bp) protein (47aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3356875_13
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11633..12655
DNA (1023bp) protein (341aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XJK1_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIJ85416.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
SR-VP_26_10_2020_1_100CM_scaffold_3356875_14
unknown

Not on your lists

12655..13242
DNA (588bp) protein (196aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3356875_15
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

13199..14512
DNA (1314bp) protein (438aa)
restriction modification system DNA specificity domain
Restriction modification system DNA specificity domain n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U401_SULKY
Restriction modification system DNA specificity domain {ECO:0000313|EMBL:ADR35417.1}; TaxID=709032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
SR-VP_26_10_2020_1_100CM_scaffold_3356875_16
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

14509..14829
DNA (321bp) protein (107aa)
hypothetical protein
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00036B6F8A
Tax=Caldatribacterium californiense
Displaying 16 items

View Taxonomy