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SR-VP_26_10_2020_1_100CM_scaffold_3609129

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_3609129_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..74)
DNA (72bp) protein (24aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_3609129_2
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(112..387)
DNA (276bp) protein (92aa)
Restriction endonuclease S subunit (EC:3.1.21.3)
Type I restriction-modification system specificity subunit S n=1 Tax=Thermococcus sp. AM4 RepID=B7R237_9EURY
Type I restriction-modification system specificity subunit S {ECO:0000313|EMBL:EEB74390.1}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_3
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(377..979)
DNA (603bp) protein (201aa)
hypothetical protein
hypothetical protein id=18248982 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=CG_Aenigma_01
SR-VP_26_10_2020_1_100CM_scaffold_3609129_4
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(996..2267)
DNA (1272bp) protein (424aa)
restriction modification system DNA specificity domain-containing protein
Restriction modification system DNA specificity domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRG3_ARCVS
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:AEA47897.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_5
unknown

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comp(2616..2972)
DNA (357bp) protein (119aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3609129_6
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

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comp(2969..3238)
DNA (270bp) protein (90aa)
PilT protein domain-containing protein
PilT protein domain protein n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V0V7_9CYAN
PilT protein domain protein {ECO:0000313|EMBL:AFZ01354.1}; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_7
unknown

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comp(3248..3367)
DNA (120bp) protein (40aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3609129_8
unknown

Not on your lists

comp(3351..3560)
DNA (210bp) protein (70aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3609129_9
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3826..4167)
DNA (342bp) protein (114aa)
hypothetical protein
Nucleotidyltransferase, putative id=3078799 bin=GWA2_OP3_52_12 species=Thermococcus gammatolerans genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Uncharacterized protein {ECO:0000313|EMBL:KFD40754.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_10
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4160..4516)
DNA (357bp) protein (119aa)
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7J9_METEZ
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ADI74072.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_11
RBG_13_OP8X_37_8_curated, Aminicenantes, Bacteria

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comp(4538..6319)
DNA (1782bp) protein (594aa)
type I restriction modification enzyme, subunit M
type I restriction endonuclease subunit M n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B37500
Tax=RBG_13_OP8X_37_8_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_12
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

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comp(6488..8005)
DNA (1518bp) protein (506aa)
Catalase (EC:1.11.1.6)
Catalase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=CATA_METBF
Tax=RBG_16_Spirochaetes_49_21_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_13
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8013..8279)
DNA (267bp) protein (89aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LLH9_METBM
Uncharacterized protein {ECO:0000313|EMBL:ABN56429.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_14
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

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comp(8293..8727)
DNA (435bp) protein (145aa)
flavodoxin
Flavodoxin n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AU0_METBF
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_15
unknown

Not on your lists

8927..9427
DNA (501bp) protein (167aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_16
unknown

Not on your lists

comp(9444..10655)
DNA (1212bp) protein (404aa)
proteasome-activating nucleotidase (EC:3.6.1.3)
Proteasome-activating nucleotidase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9X8_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_17
unknown

Not on your lists

10735..11274
DNA (540bp) protein (180aa)
hypothetical protein
UPF0200 protein Mzhil_2009 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL30_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11271..11693
DNA (423bp) protein (141aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPA5_METH6
UPF0201 protein ANME2D_01094 {ECO:0000256|HAMAP-Rule:MF_01112}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_19
unknown

Not on your lists

11693..12679
DNA (987bp) protein (329aa)
cytochrome c assembly protein
Cytochrome c assembly protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5A5_DESAT
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_20
unknown

Not on your lists

12676..13278
DNA (603bp) protein (201aa)
hypothetical protein
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNR4_9DELT
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13337..14071
DNA (735bp) protein (245aa)
gpi; Thermophilic glucose-6-phosphate isomerase (EC:5.3.1.9)
Thermophilic glucose-6-phosphate isomerase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6P8_METCZ
Thermophilic glucose-6-phosphate isomerase-like enzyme {ECO:0000313|EMBL:KCZ72664.1}; EC=5.3.1.9 {ECO:0000313|EMBL:KCZ72664.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14116..14475
DNA (360bp) protein (120aa)
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:KCZ73569.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14547..14864
DNA (318bp) protein (106aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UR5_METBU
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:KCZ73569.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_24
unknown

Not on your lists

comp(15778..17340)
DNA (1563bp) protein (521aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_3609129_25
unknown

Not on your lists

comp(17640..17996)
DNA (357bp) protein (119aa)
hypothetical protein
Dihydroneopterin aldolase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPZ3_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_26
unknown

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comp(17980..18666)
DNA (687bp) protein (229aa)
archaetidylserine synthase (EC:2.7.8.-)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12U13_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18680..19324)
DNA (645bp) protein (215aa)
phosphatidylserine decarboxylase precursor-related protein
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUC8_METHD
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_3609129_28
unknown

Not on your lists

comp(19314..20129)
DNA (816bp) protein (272aa)
cytochrome oxidase subunit I -like protein
Cytochrome oxidase subunit I-like protein n=2 Tax=Methanosarcina mazei RepID=M1QIN7_METMZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3609129_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20154..21173)
DNA (1020bp) protein (340aa)
geranylgeranyl reductase
Geranylgeranyl reductase n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QRE5_CHLP8
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:KCZ73363.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3609129_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21163..21681)
DNA (519bp) protein (173aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX02_METFV
Uncharacterized protein {ECO:0000313|EMBL:KCZ73364.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying items 1-30 of 57 in total

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