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SR-VP_26_10_2020_1_100CM_scaffold_3681266

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_3681266_1
unknown

Not on your lists

3..3239
DNA (3237bp) protein (1079aa)
chromosome segregation protein SMC
Chromosome partition protein Smc n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUL2_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_2
RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated, Falkowbacteria, Parcubacteria, Bacteria

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3400..4722
DNA (1323bp) protein (441aa)
putative cation-transporting ATPase (EC:3.6.3.-)
Putative cation-transporting ATPase n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GHB9_CALEA
Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_3
RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

4723..5829
DNA (1107bp) protein (369aa)
putative cation-transporting ATPase (EC:3.6.3.-)
Putative cation-transporting ATPase n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GHB9_CALEA
Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_4
unknown

Not on your lists

comp(5929..6291)
DNA (363bp) protein (121aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_5
unknown

Not on your lists

6560..7180
DNA (621bp) protein (207aa)
hypothetical protein
Alpha-ribazole-phosphate phosphatase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UB1_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7177..7938
DNA (762bp) protein (254aa)
cobalamin 5'-phosphate synthase
Cobalamin synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6A8_METEZ
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_7
unknown

Not on your lists

7935..8570
DNA (636bp) protein (212aa)
nucleotidyltransferase
Putative nucleotidyltransferase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVB5_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_8
unknown

Not on your lists


8601..9275
DNA (675bp) protein (225aa)
Fibrillarin
UPI0003D1A145 related cluster n=1 Tax=unknown RepID=UPI0003D1A145
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_9
unknown

Not on your lists

9369..10235
DNA (867bp) protein (289aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QLS7_METMZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_10
unknown

Not on your lists

10232..11071
DNA (840bp) protein (280aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRD8_ARCVS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_11
unknown

Not on your lists

11117..11728
DNA (612bp) protein (204aa)
metallo cofactor biosynthesis protein
Metallo cofactor biosynthesis protein n=2 Tax=Methanosarcina mazei RepID=Q8PU73_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11795..12082
DNA (288bp) protein (96aa)
regulatory protein ArsR
Regulatory protein ArsR n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D594_METSW
PAS domain S-box {ECO:0000313|EMBL:KCZ72090.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_13
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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12152..12421
DNA (270bp) protein (90aa)
Tax=BJP_IG2069_Methanobacteriales_33_27
SR-VP_26_10_2020_1_100CM_scaffold_3681266_14
unknown

Not on your lists

12441..13265
DNA (825bp) protein (275aa)
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMN1_METH6
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13279..14310)
DNA (1032bp) protein (344aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Gardnerella vaginalis 55152 RepID=I4LT76_GARVA
Uncharacterized protein {ECO:0000313|EMBL:KCZ72119.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_16
unknown

Not on your lists

14377..14865
DNA (489bp) protein (163aa)
dsbD; thiol:disulfide interchange protein
Thiol:disulfide interchange protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJQ1_IGNAJ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14852..16012)
DNA (1161bp) protein (387aa)
thiamine biosynthesis/tRNA modification protein ThiI
Probable tRNA sulfurtransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPU5_METZD
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16231..16704
DNA (474bp) protein (158aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000376D45F
Hydrogenase maturation factor {ECO:0000313|EMBL:KCZ71229.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16828..17205)
DNA (378bp) protein (126aa)
paREP15 coiled-coil protein
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JD94_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ71690.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17534..18541
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72949.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18557..18910)
DNA (354bp) protein (118aa)
Smr domain-containing protein {ECO:0000313|EMBL:KCZ72242.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_22
unknown

Not on your lists

19067..20674
DNA (1608bp) protein (536aa)
ELP3 family histone acetyltransferase
ELP3 family histone acetyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MGH9_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_23
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(20726..21166)
DNA (441bp) protein (147aa)
nucleotidyltransferase
Nucleotidyltransferase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLK2_THELI
Nucleotidyltransferase {ECO:0000313|EMBL:EHR79140.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_24
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(21159..21563)
DNA (405bp) protein (135aa)
putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
DNA-binding protein n=1 Tax=Thermococcus zilligii RepID=UPI00029ABFA9
Putative conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN {ECO:0000313|EMBL:AHL22539.1}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_25
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21844..22662)
DNA (819bp) protein (273aa)
mechanosensitive ion channel protein MscS
MscS Mechanosensitive ion channel n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5Z1_METEZ
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AKB24567.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_26
unknown

Not on your lists

comp(22773..23498)
DNA (726bp) protein (242aa)
hypothetical protein
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAS5_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_3681266_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23620..24729
DNA (1110bp) protein (370aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464W4_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ73455.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_trna_1
unknown

Not on your lists

24785..24874
DNA (90bp)
transferRNA Arg
SR-VP_26_10_2020_1_100CM_scaffold_3681266_28
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

24983..25393
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:AKG53069.1}; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
SR-VP_26_10_2020_1_100CM_scaffold_3681266_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25437..26585)
DNA (1149bp) protein (383aa)
Glycosyltransferase (EC:2.4.1.-)
Galactosyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46B90_METBF
Glycosyltransferase {ECO:0000313|EMBL:KCZ73005.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying items 1-30 of 57 in total

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