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SR-VP_26_10_2020_1_100CM_scaffold_6981401

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_6981401_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..371)
DNA (369bp) protein (123aa)
arabinose efflux permease family protein
Arabinose efflux permease family protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYZ0_METHD
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_6981401_2
unknown

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436..1884
DNA (1449bp) protein (483aa)
AAA ATPase
UPI0003D1AFA6 related cluster n=1 Tax=unknown RepID=UPI0003D1AFA6
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_3
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1870..2232)
DNA (363bp) protein (121aa)
Nucleoside 2-deoxyribosyltransferase
Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWL8_METHD
Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 {ECO:0000256|HAMAP-Rule:MF_03036}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_03036};; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_26_10_2020_1_100CM_scaffold_6981401_4
unknown

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comp(2572..2811)
DNA (240bp) protein (80aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_6981401_5
unknown

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comp(3050..3301)
DNA (252bp) protein (84aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_6981401_6
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3304..4260)
DNA (957bp) protein (319aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PQA6_MURRD
Uncharacterized protein {ECO:0000313|EMBL:GAJ41787.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.;"
SR-VP_26_10_2020_1_100CM_scaffold_6981401_7
unknown

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comp(4594..5295)
DNA (702bp) protein (234aa)
Conserved hypothetical membrane protein, peptidase family M50
Conserved hypothetical membrane protein, peptidase family M50 n=1 Tax=uncultured archaeon RepID=D1JE55_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_8
unknown

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5379..6293
DNA (915bp) protein (305aa)
aspartate carbamoyltransferase
Aspartate carbamoyltransferase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPG3_METH6
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_9
unknown

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6290..6784
DNA (495bp) protein (165aa)
aspartate carbamoyltransferase regulatory subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=PYRI_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6862..7770
DNA (909bp) protein (303aa)
ornithine carbamoyltransferase
UPI0003D1C148 related cluster n=1 Tax=unknown RepID=UPI0003D1C148
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6981401_trna_1
unknown

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7778..7862
DNA (85bp)
transferRNA Leu
SR-VP_26_10_2020_1_100CM_scaffold_6981401_11
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8155..10272)
DNA (2118bp) protein (706aa)
hypothetical protein
peptidase S8/S53 subtilisin kexin sedolisin id=7201133 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Uncharacterized protein {ECO:0000313|EMBL:KKG54947.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
SR-VP_26_10_2020_1_100CM_scaffold_6981401_trna_3
unknown

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comp(10679..10752)
DNA (74bp)
transferRNA Ile
SR-VP_26_10_2020_1_100CM_scaffold_6981401_trna_2
unknown

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10890..10961
DNA (72bp)
transferRNA Ala
SR-VP_26_10_2020_1_100CM_scaffold_6981401_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11113..11880
DNA (768bp) protein (256aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GHP5_METPE
Uncharacterized protein {ECO:0000313|EMBL:KCZ72012.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6981401_13
unknown

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12048..13337
DNA (1290bp) protein (430aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JF96_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_14
unknown

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13417..15228
DNA (1812bp) protein (604aa)
kup; potassium uptake protein Kup
Probable potassium transport system protein kup id=2248182 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured Nitrospirae bacterium MY3-5B genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_15
unknown

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15279..16427
DNA (1149bp) protein (383aa)
hypothetical protein PagrP_21089, partial id=2662915 bin=GWF1_Xanthomonadales_69_6 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_16
unknown

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16435..17532
DNA (1098bp) protein (366aa)
Tubulin/FtsZ GTPase
Tubulin/FtsZ GTPase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPD9_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17639..18103
DNA (465bp) protein (155aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7P2_METTP
Uncharacterized protein {ECO:0000313|EMBL:KCZ72759.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6981401_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18162..19379
DNA (1218bp) protein (406aa)
exodeoxyribonuclease VII large subunit
Exodeoxyribonuclease VII, large subunit n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB75_METEZ
Exodeoxyribonuclease VII large subunit {ECO:0000313|EMBL:KCZ72758.1}; EC=3.1.11.6 {ECO:0000313|EMBL:KCZ72758.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_6981401_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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19370..19597
DNA (228bp) protein (76aa)
exodeoxyribonuclease VII small subunit
UPI0003D1AA69 related cluster n=1 Tax=unknown RepID=UPI0003D1AA69
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_6981401_20
unknown

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comp(19594..19704)
DNA (111bp) protein (37aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_6981401_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19842..24098
DNA (4257bp) protein (1419aa)
hypothetical protein
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-J15 RepID=UPI000376A102
Thermitase, Xanthomonalisin {ECO:0000313|EMBL:KGJ97943.1}; EC=3.4.21.101 {ECO:0000313|EMBL:KGJ97943.1};; EC=3.4.21.66 {ECO:0000313|EMBL:KGJ97943.1};; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio psychroerythus).;"
SR-VP_26_10_2020_1_100CM_scaffold_6981401_22
unknown

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24324..25094
DNA (771bp) protein (257aa)
flavoprotein
UPI0003D1AF63 related cluster n=1 Tax=unknown RepID=UPI0003D1AF63
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_23
unknown

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25100..25324
DNA (225bp) protein (75aa)
Sm ribonucleoprotein-like protein
Small nuclear riboprotein-like protein n=1 Tax=uncultured archaeon RepID=Q2Y4N9_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_24
unknown

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25326..25664
DNA (339bp) protein (113aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EA60_METEZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_25
unknown

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comp(25693..27357)
DNA (1665bp) protein (555aa)
DNA ligase I, ATP-dependent Dnl1 (EC:6.5.1.1)
UPI0003D1BF0F related cluster n=1 Tax=unknown RepID=UPI0003D1BF0F
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_6981401_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(27456..28064)
DNA (609bp) protein (203aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZP3_FERPA
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_6981401_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

28179..28610
DNA (432bp) protein (144aa)
gcvH; glycine cleavage system protein H
Glycine cleavage system H protein n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DTS4_SULAA
Probable glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying items 1-30 of 42 in total

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