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SR-VP_26_10_2020_1_100CM_scaffold_1479803

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_1479803_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(3..149)
DNA (147bp) protein (49aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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372..923
DNA (552bp) protein (184aa)
class II aldolase/adducin family protein
Class II aldolase/adducin family protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBP8_METEZ
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:KCZ72644.1}; EC=4.1.2.17 {ECO:0000313|EMBL:KCZ72644.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1158..1412)
DNA (255bp) protein (85aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM3_METMS
Alkyl hydroperoxide reductase, large subunit {ECO:0000313|EMBL:KCZ73523.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_trna_1
unknown

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comp(1427..1501)
DNA (75bp)
transferRNA Pro
SR-VP_26_10_2020_1_100CM_scaffold_1479803_4
unknown

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1718..2203
DNA (486bp) protein (162aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2268..3080)
DNA (813bp) protein (271aa)
Quinolinate phosphoribosyltransferase
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Methanosarcina mazei RepID=M1Q597_METMZ
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000256|PIRNR:PIRNR006250}; EC=2.4.2.19 {ECO:0000256|PIRNR:PIRNR006250};; Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000256|PIRNR:PIRNR006250}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3283..4095
DNA (813bp) protein (271aa)
aspartate dehydrogenase (EC:1.4.1.21)
Probable L-aspartate dehydrogenase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8I8_METMS
Probable L-aspartate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01265}; EC=1.4.1.21 {ECO:0000256|HAMAP-Rule:MF_01265};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4097..4975
DNA (879bp) protein (293aa)
Twin-arginine translocation protein TatC
Sec-independent protein translocase, protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469I3_METBF
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_8
unknown

Not on your lists

5451..5753
DNA (303bp) protein (101aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos26E7 RepID=Q64C07_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_9
unknown

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5753..6268
DNA (516bp) protein (172aa)
response regulator receiver
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAF8_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_10
unknown

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6287..8092
DNA (1806bp) protein (602aa)
integral membrane sensor signal transduction histidine kinase
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IMG6_9PLAN
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_11
unknown

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8099..9142
DNA (1044bp) protein (348aa)
NMT1/THI5 like domain protein
NMT1/THI5 like domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZI1_FERPA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_12
RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9283..9978)
DNA (696bp) protein (232aa)
zinc transporter ZupT
Zinc transporter ZupT id=4368730 bin=GWC2_Deltaproteobacteria_42_51 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10055..11788)
DNA (1734bp) protein (578aa)
peptidase M50
Peptidase M50 family protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12Z71_METBU
Putative membrane-associated Zn-dependent protease {ECO:0000313|EMBL:KCZ72602.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_14
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(11829..12815)
DNA (987bp) protein (329aa)
transposase
Transposase n=1 Tax=Ferroplasma sp. Type II RepID=T0NGE1_9EURY
Transposase {ECO:0000313|EMBL:EQB74431.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12869..13030
DNA (162bp) protein (54aa)
ISA1214-6 transposase
Transposon-encoded protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0N615_9EURY
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_1479803_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13040..14878
DNA (1839bp) protein (613aa)
S-layer-like domain-containing protein
S-layer-like domain-containing protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEA9_9EURY
S-layer-related duplication domain {ECO:0000313|EMBL:KCZ70687.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14862..15881
DNA (1020bp) protein (340aa)
hypothetical protein
Cell surface glycoprotein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12Y38_METBU
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_1479803_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16631..16948
DNA (318bp) protein (106aa)
hypothetical protein
Putative uncharacterized protein C1_0040 n=1 Tax=uncultured archaeon RepID=Q2VP49_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ70538.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_19
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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16997..18373
DNA (1377bp) protein (459aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZUI0_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:BAP56330.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_20
unknown

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comp(18562..18789)
DNA (228bp) protein (76aa)
hypothetical protein
Putative uncharacterized protein id=2234641 bin=GWB2_Nitrospirae_rel_47_37 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_21
unknown

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comp(18887..19735)
DNA (849bp) protein (283aa)
thiazole biosynthesis protein
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJT0_PYRSN
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20486..22102)
DNA (1617bp) protein (539aa)
cell surface protein
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C21_METBF
Subtilisin-like serine protease {ECO:0000313|EMBL:KCZ72147.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22138..25689)
DNA (3552bp) protein (1184aa)
cytochrome c family protein
Metal-dependent protease n=1 Tax=Geobacillus stearothermophilus RepID=Q75TI9_GEOSE
Uncharacterized protein {ECO:0000313|EMBL:KCZ70813.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_24
unknown

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comp(26204..28972)
DNA (2769bp) protein (923aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_25
unknown

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comp(29574..30326)
DNA (753bp) protein (251aa)
F420-0:gamma-glutamyl ligase
F420-0:gamma-glutamyl ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L2M0_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(30400..31629)
DNA (1230bp) protein (410aa)
thiC; thiamine biosynthesis protein ThiC
Thiamine biosynthesis protein n=2 Tax=Methanosarcina acetivorans RepID=Q8TU14_METAC
Thiamine biosynthesis protein ThiC {ECO:0000313|EMBL:KCZ71974.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_1479803_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(31626..32492)
DNA (867bp) protein (289aa)
methylenetetrahydrofolate reductase
Methylenetetrahydrofolate reductase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UZ6_METBU
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_1479803_28
unknown

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comp(32489..33112)
DNA (624bp) protein (208aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMS8_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_1479803_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(33115..34335)
DNA (1221bp) protein (407aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8C0_METMS
Dihydropteroate synthase {ECO:0000313|EMBL:KCZ71977.1}; EC=2.5.1.15 {ECO:0000313|EMBL:KCZ71977.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying items 1-30 of 31 in total

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