ggKbase home page

SR-VP_26_10_2020_1_100CM_scaffold_2381079

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_2381079_1
unknown

Not on your lists

30..182
DNA (153bp) protein (51aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_2381079_2
unknown

Not on your lists

225..758
DNA (534bp) protein (178aa)
MarR family regulator
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CAC41
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_3
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

816..1382
DNA (567bp) protein (189aa)
hypothetical protein
Flavoredoxin id=2636707 bin=GWC2_CP_Nitrospirae-rel_42_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=GWC2_Nitrospirae_42_7_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_4
bacterium UASB270, Bacteria

Not on your lists

2033..4801
DNA (2769bp) protein (923aa)
WD repeat-containing protein
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036508D5
SEFIR domain protein {ECO:0000313|EMBL:GAK61110.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_5
unknown

Not on your lists

comp(5403..6965)
DNA (1563bp) protein (521aa)
hypothetical protein
Phytoene dehydrogenase-related protein id=24392620 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_6
unknown

Not on your lists

comp(7133..7462)
DNA (330bp) protein (110aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_2381079_7
unknown

Not on your lists

7876..8127
DNA (252bp) protein (84aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_2381079_8
unknown

Not on your lists

8134..8421
DNA (288bp) protein (96aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_2381079_9
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8582..10420)
DNA (1839bp) protein (613aa)
gsp-4; putative type II secretion system protein
Putative bacterial type II secretion system protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7N1_UNCMA
Putative bacterial type II secretion system protein {ECO:0000313|EMBL:CAJ35612.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_10
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10420..12150)
DNA (1731bp) protein (577aa)
flagella-like protein FlaI
Flagella protein FlaI n=2 Tax=Methanosarcina mazei RepID=M1Q279_METMZ
Flagella-related protein FlaI {ECO:0000313|EMBL:AKB23926.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12574..13050)
DNA (477bp) protein (159aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRC4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25815.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_12

Not on your lists

13058..14503
DNA (1446bp) protein (482aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos9D8 RepID=Q647S3_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU84354.1}; TaxID=285401 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos9D8.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_13
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14682..15566
DNA (885bp) protein (295aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7M9_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:CAJ35614.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15876..16265)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71439.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_15
unknown

Not on your lists

16729..17166
DNA (438bp) protein (146aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468A5_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17173..17499)
DNA (327bp) protein (109aa)
glutaredoxin/thioredoxin-like protein
Glutaredoxin/thioredoxin-like protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LLN8_THEBM
Glutaredoxin-like protein {ECO:0000313|EMBL:KCZ71909.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_17
unknown

Not on your lists

comp(17486..17914)
DNA (429bp) protein (143aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_18
Microcystis aeruginosa, Microcystis, Chroococcales, Cyanobacteria, Bacteria

Not on your lists

18413..21751
DNA (3339bp) protein (1113aa)
LVIVD repeat-containing protein
Genome sequencing data, contig C314 n=1 Tax=Microcystis aeruginosa PCC 7941 RepID=I4GLZ1_MICAE
Genome sequencing data, contig C314 {ECO:0000313|EMBL:CCI08952.1}; TaxID=213618 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 7941.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22141..22992
DNA (852bp) protein (284aa)
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Methanosarcina mazei RepID=M1Q0N0_METMZ
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22996..23358
DNA (363bp) protein (121aa)
RecG-like helicase {ECO:0000313|EMBL:KCZ72462.1}; EC=3.6.1.- {ECO:0000313|EMBL:KCZ72462.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_21
unknown

Not on your lists

comp(23369..23626)
DNA (258bp) protein (86aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_22
unknown

Not on your lists

comp(23738..25024)
DNA (1287bp) protein (429aa)
ATPase AAA (EC:3.6.4.3 3.6.1.3)
AAA family ATPase, CDC48 subfamily n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IEZ0_ACIB4
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_23
unknown

Not on your lists

comp(25006..25920)
DNA (915bp) protein (305aa)
AAA family ATPase, CDC48 subfamily protein (EC:3.6.4.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003703781
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_24
unknown

Not on your lists

comp(25977..26486)
DNA (510bp) protein (170aa)
heat shock protein Hsp20
Heat shock protein Hsp20 n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L3F9_KORCO
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_25
unknown

Not on your lists

comp(26511..27143)
DNA (633bp) protein (211aa)
Hth5 family protein
Hth5 family protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THE1_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_26
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27448..29541
DNA (2094bp) protein (698aa)
peptidase C1A, papain
Conserved repeat domain protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YYE7_9EURY
Conserved repeat domain protein {ECO:0000313|EMBL:EHQ35045.1}; Flags: Precursor;; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_27
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

29548..30633
DNA (1086bp) protein (362aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLV4_METH6
Uncharacterized protein {ECO:0000313|EMBL:AET63697.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(30698..33325)
DNA (2628bp) protein (876aa)
ATP-dependent DNA helicase
UPI0003D1AC73 related cluster n=1 Tax=unknown RepID=UPI0003D1AC73
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:KCZ72628.1}; EC=3.6.1.- {ECO:0000313|EMBL:KCZ72628.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2381079_29
unknown

Not on your lists

33409..34050
DNA (642bp) protein (214aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2381079_30
unknown

Not on your lists

34074..34229
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

View Taxonomy