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SR-VP_26_10_2020_1_100CM_scaffold_2598418

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_2598418_1
unknown

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127..501
DNA (375bp) protein (125aa)
NADH dehydrogenase (ubiquinone), subunit A
NADH dehydrogenase I subunit A n=1 Tax=uncultured prokaryote RepID=H5SPA0_9ZZZZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2598418_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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489..1082
DNA (594bp) protein (198aa)
NADH dehydrogenase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B 1 n=2 Tax=Chloroflexus RepID=NUOB1_CHLAA
NADH-quinone oxidoreductase, B subunit {ECO:0000313|EMBL:KCZ72544.1}; EC=1.6.5.3 {ECO:0000313|EMBL:KCZ72544.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2598418_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1079..1582
DNA (504bp) protein (168aa)
NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH dehydrogenase, subunit C n=1 Tax=mine drainage metagenome RepID=T1AXP6_9ZZZZ
NADH/F420H2 dehydrogenase, subunit C {ECO:0000313|EMBL:KCZ72543.1}; EC=1.6.5.3 {ECO:0000313|EMBL:KCZ72543.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2598418_4
unknown

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1584..2732
DNA (1149bp) protein (383aa)
NAD(P)H-quinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D id=2187526 bin=GWB2_CP_45_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2598418_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2738..3850
DNA (1113bp) protein (371aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5) id=14429490 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
F(420)H(2) oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; F(420)H(2) dehydrogenase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; FPO subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2598418_6
unknown

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3850..4266
DNA (417bp) protein (139aa)
fpoI; 11-subunit complex, subunit I (EC:1.12.98.3)
NADH dehydrogenase-like complex, subunit I n=1 Tax=Haloferax elongans ATCC BAA-1513 PF3_9EURY">RepID=M0HPF3_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2598418_7
unknown

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4263..4508
DNA (246bp) protein (82aa)
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B483_HERA2
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2598418_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4509..4757
DNA (249bp) protein (83aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2020_1_100CM_scaffold_2598418_9
unknown

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4760..5059
DNA (300bp) protein (100aa)
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)
UPI0003D1C60C related cluster n=1 Tax=unknown RepID=UPI0003D1C60C
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2598418_10
unknown

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5061..7046
DNA (1986bp) protein (662aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPK4_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2598418_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7047..8537
DNA (1491bp) protein (497aa)
F420H2 dehydrogenase subunit M (EC:1.6.99.5)
F420H2 dehydrogenase subunit M n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WG9_METBU
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:KCZ72535.1}; EC=1.6.5.3 {ECO:0000313|EMBL:KCZ72535.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2598418_12
unknown

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8534..10009
DNA (1476bp) protein (492aa)
F420H2 dehydrogenase subunit N
F420H2 dehydrogenase subunit N n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7E8_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_2598418_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10015..10365
DNA (351bp) protein (117aa)
F420H2 dehydrogenase subunit FpoO
F420H2 dehydrogenase, subunit FpoO n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6I9_METEZ
F420H2 dehydrogenase subunit O {ECO:0000313|EMBL:KCZ72533.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_2598418_14
unknown

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comp(10407..10562)
DNA (156bp) protein (52aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_2598418_15
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(10716..11789)
DNA (1074bp) protein (358aa)
UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0B8X9_9EURY
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AIY90186.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
SR-VP_26_10_2020_1_100CM_scaffold_2598418_16
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11817..14243)
DNA (2427bp) protein (809aa)
biotin synthesis protein BioC
Biotin synthesis protein BioC n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z294_EUBE2
Tax=BJP_08E140C01_Clostridiales_46_19
SR-VP_26_10_2020_1_100CM_scaffold_2598418_17

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comp(14292..15245)
DNA (954bp) protein (318aa)
family 2 glycosyl transferase
Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WY70_9DELT id=13278 bin=ACD18 species=Desulfovibrio piger genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Uncharacterized protein {ECO:0000313|EMBL:EKE06673.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SR-VP_26_10_2020_1_100CM_scaffold_2598418_18
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15254..16297)
DNA (1044bp) protein (348aa)
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B3D7_9PROT
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:GAO34661.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
SR-VP_26_10_2020_1_100CM_scaffold_2598418_19
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16302..17582)
DNA (1281bp) protein (427aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGL7_9PROT
Tax=CG_Beta_01
SR-VP_26_10_2020_1_100CM_scaffold_2598418_20
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

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comp(17590..18804)
DNA (1215bp) protein (405aa)
group 1 glycosyl transferase
Glycosyl transferase group 1 n=1 Tax=uncultured bacterium RepID=K2DJA8_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKQ85202.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
SR-VP_26_10_2020_1_100CM_scaffold_2598418_21
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18829..19893)
DNA (1065bp) protein (355aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Bacteria RepID=B5EBE4_GEOBB
Uncharacterized protein {ECO:0000313|EMBL:ACH40436.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
SR-VP_26_10_2020_1_100CM_scaffold_2598418_22
CG_Kuenen_01, Kuenenbacteria, Parcubacteria, Bacteria

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comp(19963..20748)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B40C5C
Tax=CG_Kuenen_01
SR-VP_26_10_2020_1_100CM_scaffold_2598418_23

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comp(20733..21986)
DNA (1254bp) protein (418aa)
ABC transporter-like protein
ABC transporter related protein id=4780550 bin=GWA2_Ignavibacteria-rel_35_8 species=Methanospirillum hungatei genus=Methanospirillum taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SR-VP_26_10_2020_1_100CM_scaffold_2598418_24
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22015..22647)
DNA (633bp) protein (211aa)
polysaccharide/polyol phosphate export systems, permease
ABC-type polysaccharide/polyol phosphate export systems, permease component n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWP1_SYNAS
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Displaying 24 items

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