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SR1-18-B1_scaffold_42573

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-B1_scaffold_42573_1
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

2..1210
DNA (1209bp) protein (403aa)
DNA repair protein RecN id=4748951 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RecN; DNA repair ATPase
Tax=GWC2_Nitrospirae_42_7_curated
SR1-18-B1_scaffold_42573_2
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

1578..2675
DNA (1098bp) protein (366aa)
ketoisovalerate oxidoreductase subunit VorB (EC:1.2.7.7)
Ketoisovalerate oxidoreductase subunit VorB id=2096895 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
SR1-18-B1_scaffold_42573_3
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2877..3647)
DNA (771bp) protein (257aa)
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:KJR40717.1}; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candidatus Magnetoovum chiemensis.;"
HflC protein id=14624656 bin=bin5_DeltaP species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
HflC protein
SR1-18-B1_scaffold_42573_4
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

3835..5961
DNA (2127bp) protein (709aa)
Putative uncharacterized protein id=3930456 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=GWF2_Nitrospirae_44_13_curated
SR1-18-B1_scaffold_42573_5
R_Nitrospirae_40_19, Nitrospirae, Bacteria

Not on your lists

6011..6973
DNA (963bp) protein (321aa)
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (EC:2.7.8.-)
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase id=1990158 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
SR1-18-B1_scaffold_42573_6
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6957..7862
DNA (906bp) protein (302aa)
Uncharacterized protein id=4628284 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
membrane protein
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
SR1-18-B1_scaffold_42573_7
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

comp(8274..8870)
DNA (597bp) protein (199aa)
Putative uncharacterized protein id=2758378 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Kangiella koreensis genus=Kangiella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=GWC2_Nitrospirae_42_7_curated
SR1-18-B1_scaffold_42573_8
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

comp(8884..9804)
DNA (921bp) protein (307aa)
Spermidine synthase id=2758384 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative lipoprotein
Tax=GWC2_Nitrospirae_42_7_curated
SR1-18-B1_scaffold_42573_9
unknown

Not on your lists

comp(9917..10132)
DNA (216bp) protein (72aa)

This feature has no annotations

SR1-18-B1_scaffold_42573_10
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(10175..12049)
DNA (1875bp) protein (625aa)
FAD dependent oxidoreductase id=1727351 bin=GWB2_Nitrospirae_rel_47_37 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
FAD dependent oxidoreductase
Tax=GWB2_Nitrospirae_47_37_curated
SR1-18-B1_scaffold_42573_11
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12071..13327)
DNA (1257bp) protein (419aa)
Major facilitator superfamily MFS_1 id=4044366 bin=GWF2_Nitrospirae_44_13 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
major facilitator transporter
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
SR1-18-B1_scaffold_42573_12
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13500..13703)
DNA (204bp) protein (68aa)
Putative uncharacterized protein id=2311510 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
SR1-18-B1_scaffold_42573_13
unknown

Not on your lists

comp(13742..13870)
DNA (129bp) protein (43aa)

This feature has no annotations

SR1-18-B1_scaffold_42573_14
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

14076..16574
DNA (2499bp) protein (833aa)
Putative two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IH21_9PLAN
Cache/HAMP/PAS/PAC domain-containing sensor histidine kinase response regulator
Tax=RBG_13_Nitrospirae_39_12_curated
SR1-18-B1_scaffold_42573_15
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

16636..17721
DNA (1086bp) protein (362aa)
Response regulator receiver modulated metal dependent phosphohydrolase id=4044000 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
response receiver-modulated cyclic diguanylate phosphodiesterase
Tax=GWF2_Nitrospirae_44_13_curated
SR1-18-B1_scaffold_42573_16
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17989..19857
DNA (1869bp) protein (623aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG id=3762763 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
gidA1; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Tax=BJP_IG2158_Nitrospirales_45_240
SR1-18-B1_scaffold_42573_17
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(19879..20421)
DNA (543bp) protein (181aa)
Cation efflux protein id=4128223 bin=GWF2_Nitrospirae_44_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Co/Zn/Cd cation transporter-like protein
Tax=GWF2_Nitrospirae_44_13_curated
SR1-18-B1_scaffold_42573_18
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

comp(20494..21225)
DNA (732bp) protein (244aa)
RNA methyltransferase, TrmH family, group 3 id=4282175 bin=GWF2_OP3_43_52 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
TrmH family RNA methyltransferase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
Displaying 18 items

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