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SR1-18-Sp65_coassembly_scaffold_55357

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Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_55357_1
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

268..657
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=4123807 bin=GWF2_Lentisphaerae_49_21 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
SR1-18-Sp65_coassembly_scaffold_55357_2
Synechococcus sp. JA-3-3Ab, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

673..1581
DNA (909bp) protein (303aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=321327 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium; Yellowstone A-Prime).;"
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JVS3_SYNJA
D12 class N6 adenine-specific DNA methyltransferase
SR1-18-Sp65_coassembly_scaffold_55357_3
unknown

Not on your lists

1973..2611
DNA (639bp) protein (213aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_55357_4
unknown

Not on your lists

2817..3461
DNA (645bp) protein (215aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_55357_5
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(3563..3937)
DNA (375bp) protein (125aa)
halocyanin -like protein id=14629829 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
blue (type1) copper domain-containing protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_55357_6
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(4185..7433)
DNA (3249bp) protein (1083aa)
Putative penicillin-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2T7_CALAS
putative penicillin-binding protein
Putative penicillin-binding protein {ECO:0000313|EMBL:BAL99574.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_55357_7
unknown

Not on your lists

comp(7834..8277)
DNA (444bp) protein (148aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_55357_8
unknown

Not on your lists

comp(8293..8595)
DNA (303bp) protein (101aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_55357_9
unknown

Not on your lists

comp(8666..8785)
DNA (120bp) protein (40aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_55357_10
unknown

Not on your lists

comp(8816..9064)
DNA (249bp) protein (83aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_55357_11

Not on your lists

9145..9756
DNA (612bp) protein (204aa)
2'-5' RNA ligase n=1 Tax=uncultured prokaryote RepID=H5SIR3_9ZZZZ
2'-5' RNA ligase {ECO:0000313|EMBL:BAL56049.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
2'-5' RNA ligase
SR1-18-Sp65_coassembly_scaffold_55357_12
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

9753..10181
DNA (429bp) protein (143aa)
Tax=RBG_16_Chloroflexi_54_11_curated
SR1-18-Sp65_coassembly_scaffold_55357_13
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10178..10822
DNA (645bp) protein (215aa)
phosphoribosyl transferase (EC:2.4.2.-)
Phosphoribosyl transferase {ECO:0000313|EMBL:AFV10312.1}; EC=2.4.2.- {ECO:0000313|EMBL:AFV10312.1};; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
Phosphoribosyl transferase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LE28_THEPS
SR1-18-Sp65_coassembly_scaffold_55357_14
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10907..11191)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WC71_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ17082.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
SR1-18-Sp65_coassembly_scaffold_55357_15
unknown

Not on your lists

comp(11540..11650)
DNA (111bp) protein (37aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_55357_16
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11978..13207)
DNA (1230bp) protein (410aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1A8_HERA2
integral membrane sensor signal transduction histidine kinase
Tax=BJP_IG2157_Anaerolineales_55_23
SR1-18-Sp65_coassembly_scaffold_55357_17
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(13217..13909)
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. CN3 RepID=G6H3H7_9ACTO id=1246245 bin=RBG9 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG9 organism_group=Chloroflexi
two component transcriptional regulator
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
SR1-18-Sp65_coassembly_scaffold_55357_18
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14444..15055
DNA (612bp) protein (204aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPJ8_SIDLE
Cytochrome C biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:ADE12993.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
SR1-18-Sp65_coassembly_scaffold_55357_19
Papio anubis, Papio, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(15308..16201)
DNA (894bp) protein (298aa)
Uncharacterized protein {ECO:0000313|Ensembl:ENSPANP00000006428}; TaxID=9555 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio.;" source="Papio anubis (Olive baboon).;"
SR1-18-Sp65_coassembly_scaffold_55357_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(16237..17775)
DNA (1539bp) protein (513aa)
beta-lactamase n=1 Tax=Spirosoma panaciterrae RepID=UPI000374455F
putative S12 family peptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SR1-18-Sp65_coassembly_scaffold_55357_21
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(18208..19779)
DNA (1572bp) protein (524aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Putative membrane-associated zinc metalloprotease n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0I7_THERP
putative membrane-associated zinc metalloprotease
SR1-18-Sp65_coassembly_scaffold_55357_22
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(19927..20928)
DNA (1002bp) protein (334aa)
diphosphomevalonate decarboxylase (EC:4.1.1.33); K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] id=3725 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
diphosphomevalonate decarboxylase
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
SR1-18-Sp65_coassembly_scaffold_55357_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21057..21674)
DNA (618bp) protein (206aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
SR1-18-Sp65_coassembly_scaffold_55357_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(21746..22558)
DNA (813bp) protein (271aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C7L6_DESTA
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SR1-18-Sp65_coassembly_scaffold_55357_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22612..23904)
DNA (1293bp) protein (431aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C7L7_DESTA
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
SR1-18-Sp65_coassembly_scaffold_55357_26
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(24048..25133)
DNA (1086bp) protein (362aa)
Amino acid or sugar ABC transport system, permease protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F8X6_9DELT
ABC-type branched-chain amino acid transport system, permease component
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SR1-18-Sp65_coassembly_scaffold_55357_27
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25256..25702)
DNA (447bp) protein (149aa)
Hypothetical conserved protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SHP3_9CHLR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
SR1-18-Sp65_coassembly_scaffold_55357_28
Columba livia, Columba, Columbiformes, Aves, Chordata, Metazoa

Not on your lists

comp(25858..26157)
DNA (300bp) protein (100aa)
Collagen alpha-1(XXVII) chain n=1 Tax=Columba livia RepID=R7VYC7_COLLI
Collagen alpha-1(XXVII) chain {ECO:0000313|EMBL:EMC90097.1}; TaxID=8932 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba.;" source="Columba livia (Rock dove).;"
collagen triple helix repeat protein
SR1-18-Sp65_coassembly_scaffold_55357_29
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(26133..26333)
DNA (201bp) protein (67aa)
Inner-membrane translocator n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FC70_DESAA
branched-chain amino acid ABC transporter permease
Tax=RBG_16_Armatimonadetes_67_12_curated
SR1-18-Sp65_coassembly_scaffold_55357_30
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(26334..27038)
DNA (705bp) protein (235aa)
Amino acid or sugar ABC transport system, permease protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F8X7_9DELT
branched-chain amino acid ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying items 1-30 of 93 in total

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