ggKbase home page

SR1-18-Sp65_coassembly_scaffold_157024

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_157024_1
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..746)
DNA (744bp) protein (248aa)
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_157024_2
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

1006..2304
DNA (1299bp) protein (433aa)
Putative LytR family transcriptional protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6S1_CALAS
putative LytR family transcriptional protein
Tax=RBG_13_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_157024_3
unknown

Not on your lists

2682..2948
DNA (267bp) protein (89aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_157024_4
unknown

Not on your lists

3069..3179
DNA (111bp) protein (37aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_157024_5
unknown

Not on your lists

3372..3989
DNA (618bp) protein (206aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_157024_6
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

3970..7467
DNA (3498bp) protein (1166aa)
Laminin G, domain-containing 2 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G5M0_CHLAD
laminin G domain-containing protein
Laminin G, domain-containing 2 {ECO:0000313|EMBL:ACL23731.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SR1-18-Sp65_coassembly_scaffold_157024_7
unknown

Not on your lists

7664..8218
DNA (555bp) protein (185aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_157024_8
unknown

Not on your lists

comp(8359..9027)
DNA (669bp) protein (223aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_157024_9
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(9119..9367)
DNA (249bp) protein (83aa)
Acyl carrier protein n=1 Tax=uncultured prokaryote RepID=H5SCN6_9ZZZZ
acpP; acyl carrier protein
Tax=RBG_13_Chloroflexi_68_17_curated
SR1-18-Sp65_coassembly_scaffold_157024_10

Not on your lists

9698..10732
DNA (1035bp) protein (345aa)
Isopentenyl pyrophosphate isomerase n=1 Tax=uncultured prokaryote RepID=H5SCN7_9ZZZZ
Isopentenyl pyrophosphate isomerase {ECO:0000313|EMBL:BAL53923.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
fni; isopentenyl-diphosphate delta-isomerase
SR1-18-Sp65_coassembly_scaffold_157024_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

10744..11754
DNA (1011bp) protein (337aa)
Polyprenyl synthetase n=1 Tax=uncultured prokaryote RepID=H5SCN8_9ZZZZ
polyprenyl synthetase
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_157024_12
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11794..12972)
DNA (1179bp) protein (393aa)
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
Coproporphyrinogen III oxidase, anaerobic n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RKX7_MOOTA
SR1-18-Sp65_coassembly_scaffold_157024_13
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

13189..13491
DNA (303bp) protein (101aa)
Uncharacterized protein id=3704171 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
SR1-18-Sp65_coassembly_scaffold_157024_14
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

13515..13784
DNA (270bp) protein (90aa)
Uncharacterized protein id=1705540 bin=GWB2_Chloroflexi_49_20 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_157024_15
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

14046..15017
DNA (972bp) protein (324aa)
Arsenite-activated ATPase ArsA id=3704172 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arsenite-activated ATPase ArsA
Tax=RBG_16_Chloroflexi_57_11_curated
SR1-18-Sp65_coassembly_scaffold_157024_16
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

15032..16012
DNA (981bp) protein (327aa)
Arsenite-activated ATPase ArsA id=3704173 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arsenite-activated ATPase ArsA
Tax=RBG_16_Chloroflexi_57_11_curated
SR1-18-Sp65_coassembly_scaffold_157024_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

16014..16664
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RM3_SYMTH
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_157024_18
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

16803..17132
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NN05_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU58934.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SR1-18-Sp65_coassembly_scaffold_157024_19
unknown

Not on your lists

17410..17730
DNA (321bp) protein (107aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_157024_20
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(17585..19639)
DNA (2055bp) protein (685aa)
carbon starvation protein CstA; K06200 carbon starvation protein id=14627141 bin=bin7_NC10_sister species=Pyrobaculum neutrophilum genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
carbon starvation protein, predicted membrane protein
Tax=RBG_16_Chloroflexi_57_11_curated
SR1-18-Sp65_coassembly_scaffold_157024_21
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(19790..20185)
DNA (396bp) protein (132aa)
id=14627140 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RBG_16_Chloroflexi_57_11_curated
SR1-18-Sp65_coassembly_scaffold_157024_22
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

20659..22371
DNA (1713bp) protein (571aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUG1_HERA2
phosphoenolpyruvate carboxykinase
SR1-18-Sp65_coassembly_scaffold_157024_23
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(22407..24131)
DNA (1725bp) protein (575aa)
fadD3; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=14425414 bin=bin1_lowGC species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
lcfA; Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) (EC:6.2.1.3)
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_157024_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

24346..24969
DNA (624bp) protein (208aa)
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N6D3_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_157024_25
unknown

Not on your lists

24966..25247
DNA (282bp) protein (94aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_157024_26
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

25201..25758
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLT6_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
SR1-18-Sp65_coassembly_scaffold_157024_27
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25771..26229
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39QK3_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33471.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
SR1-18-Sp65_coassembly_scaffold_157024_28
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

26207..27805
DNA (1599bp) protein (533aa)
Putative polysaccharide biosynthesis protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1F3_CALAS
putative polysaccharide biosynthesis protein
Putative polysaccharide biosynthesis protein {ECO:0000313|EMBL:BAL99090.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_157024_29
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

27805..28779
DNA (975bp) protein (325aa)
Oxidoreductase domain protein {ECO:0000313|EMBL:KKQ67226.1}; TaxID=1618422 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_24.;"
oxidoreductase domain protein id=4315809 bin=GWC2_CPR2_39_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
oxidoreductase
SR1-18-Sp65_coassembly_scaffold_157024_30
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

28772..29410
DNA (639bp) protein (213aa)
Putative sugar acetyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8S5_CALAS
putative sugar acetyltransferase
Putative sugar acetyltransferase {ECO:0000313|EMBL:BAM01663.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Displaying items 1-30 of 43 in total

View Taxonomy