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SR1-18-Sp65_coassembly_scaffold_423487

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_423487_1
Thermobaculum terrenum, Thermobaculum, Bacteria

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63..560
DNA (498bp) protein (166aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG18_THET1
SR1-18-Sp65_coassembly_scaffold_423487_2

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565..1128
DNA (564bp) protein (188aa)
Holliday junction ATP-dependent DNA helicase RuvA n=2 Tax=Geobacter metallireducens RepID=RUVA_GEOMG
Marine sediment metagenome DNA, contig: S03H2_S03071 {ECO:0000313|EMBL:GAH53556.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ruvA; Holliday junction DNA helicase RuvA
SR1-18-Sp65_coassembly_scaffold_423487_3
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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1540..1929
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI0003688EC3
HEPN domain-containing protein
Tax=RBG_16_Planctomycetes_55_9_curated
SR1-18-Sp65_coassembly_scaffold_423487_4
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(1963..4056)
DNA (2094bp) protein (698aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1Q0_ANATU
hypothetical protein
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_423487_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4216..5550)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002F8C656
glutamate-1-semialdehyde aminotransferase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
SR1-18-Sp65_coassembly_scaffold_423487_6
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(5657..7372)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9U4_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM02032.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_423487_7
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7576..8436)
DNA (861bp) protein (287aa)
ompA1; OmpA/MotB domain protein (EC:1.1.3.9)
OmpA/MotB domain protein {ECO:0000313|EMBL:CCG98072.1}; EC=1.1.3.9 {ECO:0000313|EMBL:CCG98072.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
OmpA/MotB domain protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K1R9_9BACT
SR1-18-Sp65_coassembly_scaffold_423487_8
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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8999..9724
DNA (726bp) protein (242aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZA8_ROSS1
hydrolase
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ABQ91961.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SR1-18-Sp65_coassembly_scaffold_423487_9
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9734..10597
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PS42_METMA
Uncharacterized protein {ECO:0000313|EMBL:AKB12331.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_423487_10
unknown

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comp(10727..10855)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 10 items

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