ggKbase home page

SR1-18-Sp65_coassembly_scaffold_7158

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_7158_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

48..485
DNA (438bp) protein (146aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
SR1-18-Sp65_coassembly_scaffold_7158_2
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(521..1804)
DNA (1284bp) protein (428aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IR32_9PLAN
histidine kinase, hybrid
SR1-18-Sp65_coassembly_scaffold_7158_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(1858..3354)
DNA (1497bp) protein (499aa)
Histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBE69890.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative Histidine kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML48_9BACT
SR1-18-Sp65_coassembly_scaffold_7158_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(3296..4027)
DNA (732bp) protein (244aa)
Response regulator in two-component regulatory system with PhoR (Or CreC), regulation of Pi uptake (OmpR family) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML49_9BACT
phoB; response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family)
Response regulator in two-component regulatory system with PhoR (Or CreC), regulation of Pi uptake (OmpR family) {ECO:0000313|EMBL:CBE69891.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
SR1-18-Sp65_coassembly_scaffold_7158_5
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(4133..4879)
DNA (747bp) protein (249aa)
rrs:RoseRS_0608 hypothetical protein id=1247324 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
SR1-18-Sp65_coassembly_scaffold_7158_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(4869..5960)
DNA (1092bp) protein (364aa)
rrs:RoseRS_0609 ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein id=1247325 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ApbE family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:ABQ89031.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SR1-18-Sp65_coassembly_scaffold_7158_7
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(6075..6509)
DNA (435bp) protein (145aa)
peptidase id=1247327 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
SR1-18-Sp65_coassembly_scaffold_7158_8
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

6752..8107
DNA (1356bp) protein (452aa)
Aminopeptidase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L291_THERP
aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:ACM05964.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SR1-18-Sp65_coassembly_scaffold_7158_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

8126..8902
DNA (777bp) protein (259aa)
UPF0271 protein STH2522 n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Y2522_SYMTH
LamB/YcsF family protein
Tax=RBG_16_Acidobacteria_70_10_curated
SR1-18-Sp65_coassembly_scaffold_7158_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

8902..10599
DNA (1698bp) protein (566aa)
allophanate hydrolase id=24419636 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
allophanate hydrolase
Tax=RBG_16_Acidobacteria_70_10_curated
SR1-18-Sp65_coassembly_scaffold_7158_11
unknown

Not on your lists

comp(10609..10782)
DNA (174bp) protein (58aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_7158_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11005..11268)
DNA (264bp) protein (88aa)
Addiction module toxin, RelE/StbE family id=4187608 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
addiction module antitoxin
Tax=GWA2_Rokubacteria_70_23_curated
SR1-18-Sp65_coassembly_scaffold_7158_13
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(11274..11552)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3T3_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99920.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_7158_14
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(11557..11763)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7JUN6_CYAP8
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_7158_trna_1
unknown

Not on your lists

comp(11930..12000)
DNA (71bp)
transferRNA Gln
SR1-18-Sp65_coassembly_scaffold_7158_15
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

12106..13806
DNA (1701bp) protein (567aa)
Extracellular solute-binding protein family 5 n=2 Tax=Chloroflexus RepID=A9WKA8_CHLAA
extracellular solute-binding protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_7158_16
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13915..14868)
DNA (954bp) protein (318aa)
Glycosyl transferase family 2 n=1 Tax=Marichromatium purpuratum 984 RepID=F9U205_MARPU
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:AHF04915.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
SR1-18-Sp65_coassembly_scaffold_7158_17
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(14865..15857)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LGY4_9BACT
hypothetical protein
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_7158_18
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(15861..17162)
DNA (1302bp) protein (434aa)
O-antigen polymerase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9X8_CALAS
O-antigen polymerase family protein
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_7158_19
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(17159..17728)
DNA (570bp) protein (190aa)
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase {ECO:0000313|EMBL:ABQ92561.1}; EC=3.1.3.- {ECO:0000313|EMBL:ABQ92561.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V108_ROSS1
histidinol-phosphate phosphatase family protein
SR1-18-Sp65_coassembly_scaffold_7158_20
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(17725..17892)
DNA (168bp) protein (56aa)
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_7158_21
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(17896..19266)
DNA (1371bp) protein (457aa)
UDP-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NR11_ROSCS
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_7158_22
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(19352..20371)
DNA (1020bp) protein (340aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] id=24579964 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
GHMP kinase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_7158_23
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(20416..21525)
DNA (1110bp) protein (370aa)
NAD-dependent epimerase/dehydratase family protein id=4761862 bin=GWA2_Elusimicrobia_69_24 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
NAD-dependent epimerase/dehydratase family protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_7158_24
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(21649..23409)
DNA (1761bp) protein (587aa)
Glycosyl transferase, group 1 n=3 Tax=Thermoanaerobacter RepID=B0K515_THEPX
glycosyl transferase group 1
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_7158_25
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(23446..24366)
DNA (921bp) protein (307aa)
Glycosyl transferase group 1 id=4022652 bin=GWF2_OP9_related_35_9 species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
group 1 glycosyl transferase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_7158_26
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(24493..26856)
DNA (2364bp) protein (788aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IIP7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO78953.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_7158_27
unknown

Not on your lists

comp(26853..28067)
DNA (1215bp) protein (405aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_7158_28
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(28064..29653)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q111J2_TRIEI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG51832.1}; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium erythraeum (strain IMS101).;"
SR1-18-Sp65_coassembly_scaffold_7158_29
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(29650..30876)
DNA (1227bp) protein (409aa)
Glycosyl transferase group 1 id=2553128 bin=GWA2_Elusi_like_61_42 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
group 1 glycosyl transferase
Tax=CG_Micra_05
Displaying items 1-30 of 47 in total

View Taxonomy