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SR1-18-Sp65_coassembly_scaffold_170457

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_170457_1
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2..595)
DNA (594bp) protein (198aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F0B8_SPICH
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEJ18982.1}; Flags: Precursor;; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
SR1-18-Sp65_coassembly_scaffold_170457_2
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(722..2203)
DNA (1482bp) protein (494aa)
Extracellular solute-binding protein family 1 id=4944864 bin=GWC2_Chloroflexi_73_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
family 1 extracellular solute-binding protein
Tax=GWC2_RIF_CHLX_73_18_curated
SR1-18-Sp65_coassembly_scaffold_170457_3
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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2462..2947
DNA (486bp) protein (162aa)
Putative uncharacterized protein id=2289591 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
SR1-18-Sp65_coassembly_scaffold_170457_4
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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3055..4200
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1ICE5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO81140.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
2-alkenal reductase
SR1-18-Sp65_coassembly_scaffold_170457_5
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(4197..4724)
DNA (528bp) protein (176aa)
hypothetical protein id=24451864 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Picea sitchensis genus=Picea taxon_order=Coniferales taxon_class=Coniferopsida phylum=Streptophyta tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Aminicenantes_63_16_curated
SR1-18-Sp65_coassembly_scaffold_170457_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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4890..5300
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003741CEB
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABJ82594.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR1-18-Sp65_coassembly_scaffold_170457_7

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5533..6171
DNA (639bp) protein (213aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum RepID=Q67LD3_SYMTH id=1241440 bin=RBG2 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S12H4_S11850 {ECO:0000313|EMBL:GAJ15993.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative RNA polymerase ECF-type sigma factor
SR1-18-Sp65_coassembly_scaffold_170457_8
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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comp(6253..7323)
DNA (1071bp) protein (357aa)
hypothetical protein id=1699774 bin=GWB2_Chloroflexi_49_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_170457_9
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(7407..7853)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI000346D354
hypothetical protein
Tax=RBG_13_Chloroflexi_57_8_curated
SR1-18-Sp65_coassembly_scaffold_170457_10
unknown

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comp(8237..8920)
DNA (684bp) protein (228aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_170457_11
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

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comp(8959..10071)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3Q1_CALAS
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
SR1-18-Sp65_coassembly_scaffold_170457_12
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(10601..11662)
DNA (1062bp) protein (354aa)
Peptidoglycan-binding LysM n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JZI0_ARTS2
peptidoglycan-binding LysM
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_170457_13
candidate division Zixibacteria, Bacteria

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comp(11691..13700)
DNA (2010bp) protein (670aa)
Acylaminoacyl-peptidase YuxL id=1250176 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Acylaminoacyl-peptidase YuxL {ECO:0000313|EMBL:EQB63039.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
SR1-18-Sp65_coassembly_scaffold_170457_14
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(13739..14224)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000361A78C
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_170457_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(14229..16037)
DNA (1809bp) protein (603aa)
Oligoendopeptidase, pepF/M3 family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4M3_9CHLR
Oligoendopeptidase, pepF/M3 family {ECO:0000313|EMBL:EFH81453.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
pepF/M3 family oligoendopeptidase
SR1-18-Sp65_coassembly_scaffold_170457_16
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(16095..17981)
DNA (1887bp) protein (629aa)
gdhA2; glutamate dehydrogenase A GdhA2 (EC:1.4.1.3)
Glutamate dehydrogenase n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G2X1_9DELT
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_170457_17
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

18122..20545
DNA (2424bp) protein (808aa)
Putative Histidine kinase id=3068378 bin=GWC2_Methylomirabilis_70_16 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor signal transduction histidine kinase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_170457_18
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

20542..20991
DNA (450bp) protein (150aa)
response regulator receiver protein id=14426277 bin=bin1_lowGC species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
response regulator receiver domain-containing protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_170457_19
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(21024..21422)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJU1_ANADE
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_170457_20
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21400..22197)
DNA (798bp) protein (266aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q097N0_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO75767.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU67941.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SR1-18-Sp65_coassembly_scaffold_170457_21
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

22267..24081
DNA (1815bp) protein (605aa)
Elongation factor 4 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C337_SPHTD
GTP-binding protein LepA
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_170457_22
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

24167..24943
DNA (777bp) protein (259aa)
enoyl-CoA hydratase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00036BAB4C
3-hydroxybutyryl-CoA dehydratase
Tax=CG_Dehalo_02
SR1-18-Sp65_coassembly_scaffold_170457_23
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

24930..26939
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI0003632E0F
Glycosyl transferase family 39 {ECO:0000313|EMBL:EFH86504.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
glycosyl transferase family protein
SR1-18-Sp65_coassembly_scaffold_170457_24
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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27061..27738
DNA (678bp) protein (226aa)
atm:ANT_13130 putative glycosyltransferase (EC:2.4.-.-) id=1246616 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
dolichyl-phosphate mannose synthase-like protein
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_170457_25
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

27746..28411
DNA (666bp) protein (222aa)
GDP-mannose--undecaprenyl-phosphate mannosyltransferase, putative id=2188873 bin=GWB2_Proteobacteria_55_19 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
glycosyl transferase family protein
Tax=RBG_13_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_170457_26
unknown

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28418..29077
DNA (660bp) protein (220aa)

This feature has no annotations

Displaying 26 items

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