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SR1-18-Sp65_coassembly_scaffold_163931

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_163931_1
unknown

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3..128
DNA (126bp) protein (42aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_163931_2
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

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comp(138..698)
DNA (561bp) protein (187aa)
Tax=RBG_16_Chloroflexi_54_11_curated
SR1-18-Sp65_coassembly_scaffold_163931_3
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(810..2234)
DNA (1425bp) protein (475aa)
putative cytochrome c with 6 heme-binding motifs
Cytochrome c family protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0H4_ANATU
cytochrome c family protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_163931_4
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(2238..3350)
DNA (1113bp) protein (371aa)
Putative cytochrome c with 9 CxxCH heme-binding motifs
Putative cytochrome c with 9 heme-binding motifs
atm:ANT_26980 cytochrome c family protein id=1246362 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
cytochrome c family protein
SR1-18-Sp65_coassembly_scaffold_163931_5
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

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comp(3611..4417)
DNA (807bp) protein (269aa)
Xylose isomerase domain protein TIM barrel id=1895591 bin=GWB2_Chloroflexi_54_36 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
xylose isomerase
Tax=CG_Anaero_01
SR1-18-Sp65_coassembly_scaffold_163931_6
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(4529..5659)
DNA (1131bp) protein (377aa)
amidase (EC:3.5.2.10)
Creatinine amidohydrolase, putative id=1895663 bin=GWB2_Chloroflexi_54_36 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=BJP_IG2069_Anaerolineales_43_63
SR1-18-Sp65_coassembly_scaffold_163931_7
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5663..6502)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5W4_CALAS
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
SR1-18-Sp65_coassembly_scaffold_163931_8
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(6510..7583)
DNA (1074bp) protein (358aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I871_CALAS
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAM01459.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SR1-18-Sp65_coassembly_scaffold_163931_9
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(7602..9968)
DNA (2367bp) protein (789aa)
Putative ABC transporter permease protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I870_CALAS
ABC transporter permease
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_163931_10
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(10036..11259)
DNA (1224bp) protein (408aa)
Putative ABC transporter substrate binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I869_CALAS
putative ABC transporter substrate binding protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_163931_11
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(11414..12568)
DNA (1155bp) protein (385aa)
hypothetical protein id=24494059 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermofilum sp. 1910b genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
alcohol dehydrogenase
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_163931_12
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(12587..13597)
DNA (1011bp) protein (337aa)
LacI family transcription regulator n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFL3_9BACT
LacI family transcription regulator {ECO:0000313|EMBL:BAL54949.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
LacI family transcriptional regulator
SR1-18-Sp65_coassembly_scaffold_163931_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13674..15020)
DNA (1347bp) protein (449aa)
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit id=24440552 bin=RBG_19FT_COMBO_GAL15_69_19 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SR1-18-Sp65_coassembly_scaffold_163931_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(15058..16281)
DNA (1224bp) protein (408aa)
FAD linked oxidase-like protein id=3874889 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
FAD linked oxidase-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
SR1-18-Sp65_coassembly_scaffold_163931_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(16664..18145)
DNA (1482bp) protein (494aa)
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG87_9CHLR
FAD linked oxidase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
SR1-18-Sp65_coassembly_scaffold_163931_16
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(18135..18533)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SIR5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY69841.1}; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp. PCC 7367.;"
SR1-18-Sp65_coassembly_scaffold_163931_17
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(18548..18967)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JI99_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
SR1-18-Sp65_coassembly_scaffold_163931_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(19125..20744)
DNA (1620bp) protein (540aa)
malate synthase; K01638 malate synthase [EC:2.3.3.9] id=24580023 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
malate synthase
Tax=RBG_16_RIF_WS3X_71_46_curated
SR1-18-Sp65_coassembly_scaffold_163931_19
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

Not on your lists

comp(20880..21863)
DNA (984bp) protein (328aa)
Transketolase domain protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SN50_9CHLR
Transketolase domain protein {ECO:0000313|EMBL:BAL57586.1}; TaxID=166587 species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
transketolase central region
SR1-18-Sp65_coassembly_scaffold_163931_20
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(21954..22475)
DNA (522bp) protein (174aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZRW1_9PLAN
Pyridoxamine 5''-phosphate oxidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
SR1-18-Sp65_coassembly_scaffold_163931_21
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(22490..23452)
DNA (963bp) protein (321aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:ACZ40876.1}; EC=1.2.4.4 {ECO:0000313|EMBL:ACZ40876.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAN3_SPHTD
SR1-18-Sp65_coassembly_scaffold_163931_22
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(23534..24301)
DNA (768bp) protein (256aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DF86_9EURY
3-hydroxyacyl-CoA dehydrogenase
Tax=RBG_16_Deltaproteobacteria_50_11_curated
SR1-18-Sp65_coassembly_scaffold_163931_23
unknown

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24710..25891
DNA (1182bp) protein (394aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_163931_24
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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25976..26623
DNA (648bp) protein (216aa)
DNA-binding protein
Putative transcriptional regulator id=3604717 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
Displaying 24 items

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