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SR1-18-Sp65_coassembly_scaffold_485825

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_485825_1
unknown

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comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_485825_2
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

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164..3646
DNA (3483bp) protein (1161aa)
Isoleucyl-tRNA synthetase n=1 Tax=Smithella sp. ME-1 RepID=V4F9G8_9DELT
isoleucyl-tRNA synthetase
Tax=RBG_16_Chloroflexi_54_11_curated
SR1-18-Sp65_coassembly_scaffold_485825_3
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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3735..4235
DNA (501bp) protein (167aa)
DNA-binding protein n=1 Tax=Streptomyces sp. C RepID=D9VS04_9ACTO
TraR/DksA family transcriptional regulator
Tax=RBG_13_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_485825_4
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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4249..4773
DNA (525bp) protein (175aa)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3L6_9FIRM
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_485825_5
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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4815..6248
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RN09_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35376.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
SR1-18-Sp65_coassembly_scaffold_485825_6
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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6302..7249
DNA (948bp) protein (316aa)
pseudouridine synthase (EC:4.2.1.70)
Pseudouridine synthase id=2316266 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=GWB2_Chloroflexi_54_36_curated
SR1-18-Sp65_coassembly_scaffold_485825_7
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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7257..8546
DNA (1290bp) protein (430aa)
Oxygen-independent coproporphyrinogen-III oxidase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I537_CALAS
hemN; oxygen-independent coproporphyrinogen-III oxidase
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_485825_8
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

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comp(8728..9738)
DNA (1011bp) protein (337aa)
Putative polyprenyl synthetase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2Z6_CALAS
putative polyprenyl synthetase
Tax=RBG_13_Chloroflexi_54_9_curated
SR1-18-Sp65_coassembly_scaffold_485825_9

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comp(9731..10771)
DNA (1041bp) protein (347aa)
fni; isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl pyrophosphate isomerase n=1 Tax=uncultured prokaryote RepID=H5SCN7_9ZZZZ
Isopentenyl pyrophosphate isomerase {ECO:0000313|EMBL:BAL53923.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
SR1-18-Sp65_coassembly_scaffold_485825_10
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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10979..11221
DNA (243bp) protein (81aa)
Acyl carrier protein n=1 Tax=uncultured prokaryote RepID=H5SCN6_9ZZZZ
acpP; acyl carrier protein
Tax=RBG_16_Chloroflexi_52_11_curated
SR1-18-Sp65_coassembly_scaffold_485825_11
unknown

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11376..11714
DNA (339bp) protein (113aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_485825_12
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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11778..12458
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B72C76
Uncharacterized protein, similar to the N-terminal domain of Lon protease
Tax=RBG_16_Chloroflexi_68_14_curated
SR1-18-Sp65_coassembly_scaffold_485825_13

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12476..13141
DNA (666bp) protein (222aa)
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJF2_9CHLR
Marine sediment metagenome DNA, contig: S12H4_L05003 {ECO:0000313|EMBL:GAI82798.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
molybdopterin-guanine dinucleotide biosynthesis protein MobB
SR1-18-Sp65_coassembly_scaffold_485825_14
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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13147..13995
DNA (849bp) protein (283aa)
formate dehydrogenase family accessory protein (FdhD) id=24540630 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
formate dehydrogenase family accessory protein (FdhD)
Tax=CG_Anaero_04
SR1-18-Sp65_coassembly_scaffold_485825_15
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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14003..15265
DNA (1263bp) protein (421aa)
ttr:Tter_1452 molybdenum cofactor synthesis domain protein; K03750 molybdopterin biosynthesis protein MoeA id=1241587 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
molybdenum cofactor synthesis domain-containing protein
Tax=RBG_16_Chloroflexi_57_9_curated
SR1-18-Sp65_coassembly_scaffold_485825_16
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15355..15906
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000373C1FE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD41290.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
SR1-18-Sp65_coassembly_scaffold_485825_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(15959..17329)
DNA (1371bp) protein (457aa)
atm:ANT_15320 folC; folylpolyglutamate synthetase (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] id=1246746 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
folC; folylpolyglutamate synthetase (EC:6.3.2.17)
Tax=RBG_16_Chloroflexi_63_12_curated
SR1-18-Sp65_coassembly_scaffold_485825_18

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17583..18509
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C269_SPHTD
Marine sediment metagenome DNA, contig: S01H1_S00202 {ECO:0000313|EMBL:GAF98535.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_485825_19
unknown

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18577..18645
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 19 items

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