ggKbase home page

SR1-18-Sp65_coassembly_scaffold_542368

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_542368_1
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1..1725)
DNA (1725bp) protein (575aa)
VCBS {ECO:0000313|EMBL:ABA23759.1}; EC=3.4.21.10 {ECO:0000313|EMBL:ABA23759.1};; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
hypothetical protein (EC:3.4.21.10)
VCBS n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M5H7_ANAVT
SR1-18-Sp65_coassembly_scaffold_542368_2
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(2459..2800)
DNA (342bp) protein (114aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASU8_RUBXD
two component LuxR family transcriptional regulator
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_3
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2800..3525)
DNA (726bp) protein (242aa)
Aquaporin Z n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RBW2_DESPD
MIP family channel protein
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
SR1-18-Sp65_coassembly_scaffold_542368_4
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(3522..3908)
DNA (387bp) protein (129aa)
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_5
unknown

Not on your lists

3999..4229
DNA (231bp) protein (77aa)

This feature has no annotations

SR1-18-Sp65_coassembly_scaffold_542368_6
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(4113..4772)
DNA (660bp) protein (220aa)
Response regulator receiver id=1699108 bin=GWB2_Chloroflexi_49_20 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
putative NarL family two-component response regulator
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_7
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(4905..7796)
DNA (2892bp) protein (964aa)
Putative signal transduction histidine kinase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBQ5_9CHLR
putative signal transduction histidine kinase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_8
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(7971..9245)
DNA (1275bp) protein (425aa)
L-rhamnose isomerase (EC:5.3.1.14)
L-rhamnose isomerase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPK9_ROSCS
Tax=RBG_16_Chloroflexi_52_11_curated
SR1-18-Sp65_coassembly_scaffold_542368_9
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(9292..9615)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WGG2_CHLAA
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_10
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9671..10750)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00036E7C07
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:ETT61994.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
glycosyl hydrolase
SR1-18-Sp65_coassembly_scaffold_542368_11
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10774..12330)
DNA (1557bp) protein (519aa)
xylB; xylulose kinase (EC:2.7.1.17)
Xylulose kinase {ECO:0000313|EMBL:BAJ64517.1}; EC=2.7.1.17 {ECO:0000313|EMBL:BAJ64517.1};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Xylulose kinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZG9_ANATU
SR1-18-Sp65_coassembly_scaffold_542368_12
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(12330..14675)
DNA (2346bp) protein (782aa)
Xyl3A n=1 Tax=Caldanaerobius polysaccharolyticus RepID=I6R6X6_9THEO
glycoside hydrolase family 3
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_13
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(14672..15841)
DNA (1170bp) protein (390aa)
xylA; xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Xylose isomerase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0Z5_ANATU
SR1-18-Sp65_coassembly_scaffold_542368_14
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15862..17022)
DNA (1161bp) protein (387aa)
Oxidoreductase n=1 Tax=Bacillus nealsonii AAU1 RepID=R9BYX1_9BACI
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EES74063.1}; TaxID=621372 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. oral taxon 786 str. D14.;"
oxidoreductase
SR1-18-Sp65_coassembly_scaffold_542368_15
bacterium UASB270, Bacteria

Not on your lists

comp(17069..18094)
DNA (1026bp) protein (342aa)
Oxidoreductase domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GLW4_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:GAK58334.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
oxidoreductase domain-containing protein
SR1-18-Sp65_coassembly_scaffold_542368_16
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18098..19531)
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000368EBF9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK71468.1}; TaxID=1288313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans DSM 3504.;"
SR1-18-Sp65_coassembly_scaffold_542368_17
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

19681..23274
DNA (3594bp) protein (1198aa)
Putative two-component hybrid sensor and regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5E8_CALAS
putative two-component hybrid sensor and regulator
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_18
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

23410..24909
DNA (1500bp) protein (500aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLY7_ROSCS
oligopeptide/dipeptide ABC transporter ATPase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_19
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

24979..27078
DNA (2100bp) protein (700aa)
Extracellular solute-binding protein family 5 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLY6_ROSCS
extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ABU58534.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SR1-18-Sp65_coassembly_scaffold_542368_20
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

27227..28213
DNA (987bp) protein (329aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLY5_ROSCS
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABU58533.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SR1-18-Sp65_coassembly_scaffold_542368_21
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

28220..29377
DNA (1158bp) protein (386aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLY4_ROSCS
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_22
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

29395..30429
DNA (1035bp) protein (345aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLY3_ROSCS
oligopeptide/dipeptide ABC transporter ATPase
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_23
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

30539..33127
DNA (2589bp) protein (863aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLX8_ROSCS
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR1-18-Sp65_coassembly_scaffold_542368_24
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

33166..34866
DNA (1701bp) protein (567aa)
Radical SAM domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLY2_ROSCS
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABU58530.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SR1-18-Sp65_coassembly_scaffold_542368_25
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34872..35072
DNA (201bp) protein (67aa)
glyoxalase n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI00036D5B47
lactoylglutathione lyase-like lyase
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:AFM00991.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
SR1-18-Sp65_coassembly_scaffold_542368_26

Not on your lists

35082..36023
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46A33_METBF
Uncharacterized protein {ECO:0000313|EMBL:KKL53655.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_542368_27

Not on your lists

36034..36720
DNA (687bp) protein (229aa)
Putative phosphatase n=1 Tax=uncultured bacterium RepID=K2D5L3_9BACT
Putative phosphatase {ECO:0000313|EMBL:EKD88808.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
HAD-superfamily hydrolase, subfamily IA, variant 1
SR1-18-Sp65_coassembly_scaffold_542368_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

36701..38662
DNA (1962bp) protein (654aa)
Putative dehydratase, YjhG/YagF family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMC5_SINAD
dehydratase
Putative dehydratase, YjhG/YagF family {ECO:0000313|EMBL:AGA30392.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SR1-18-Sp65_coassembly_scaffold_542368_29
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38846..39562
DNA (717bp) protein (239aa)
Fumarylacetoacetate hydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQD8_9GAMM
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:EIL89429.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
fumarylacetoacetate (FAA) hydrolase
SR1-18-Sp65_coassembly_scaffold_542368_30
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

39555..40337
DNA (783bp) protein (261aa)
SAM-dependent methlyltransferase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3BC52
type 11 methyltransferase
Tax=RBG_16_Chloroflexi_56_8_curated
Displaying items 1-30 of 73 in total

View Taxonomy