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SR1-18-Sp65_coassembly_scaffold_617739

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR1-18-Sp65_coassembly_scaffold_617739_1
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1..381)
DNA (381bp) protein (127aa)
Lipoprotein, Bmp family n=1 Tax=Clostridium ultunense Esp RepID=M1ZAG8_9CLOT
lipoprotein, Bmp family
Tax=GWF2_Verrucomicrobia_62_7_curated
SR1-18-Sp65_coassembly_scaffold_617739_2
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(466..1818)
DNA (1353bp) protein (451aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase (EC:3.5.4.28)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNK4_DESK7
SR1-18-Sp65_coassembly_scaffold_617739_3

Not on your lists

comp(1834..3201)
DNA (1368bp) protein (456aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DPD0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD88524.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
amidohydrolase
SR1-18-Sp65_coassembly_scaffold_617739_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3283..4515)
DNA (1233bp) protein (411aa)
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJB4_ALKMQ
Tax=RBG_16_Bathyarchaeota_48_13_curated
SR1-18-Sp65_coassembly_scaffold_617739_5
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4544..5344)
DNA (801bp) protein (267aa)
HpcH/HpaI aldolase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1Q4_ROSS1
HpcH/HpaI aldolase
Tax=GWF2_Verrucomicrobia_62_7_curated
SR1-18-Sp65_coassembly_scaffold_617739_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5364..6335)
DNA (972bp) protein (324aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPC4_ARCVS
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SR1-18-Sp65_coassembly_scaffold_617739_7

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comp(6426..7199)
DNA (774bp) protein (258aa)
Transcriptional regulator n=1 Tax=uncultured bacterium RepID=K2DM49_9BACT
Transcriptional regulator {ECO:0000313|EMBL:EKD87639.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FadR family transcriptional regulator
SR1-18-Sp65_coassembly_scaffold_617739_8
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(8051..9190)
DNA (1140bp) protein (380aa)
Dihydroorotate dehydrogenase family protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R8T3_SPISS
dihydroorotate dehydrogenase
Tax=CG_Anaero_02
SR1-18-Sp65_coassembly_scaffold_617739_9
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(9183..9461)
DNA (279bp) protein (93aa)
id=1960936 bin=GWD2_Chloroflexi_49_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_617739_10
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(9458..11449)
DNA (1992bp) protein (664aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase id=4215805 bin=GWC2_Chloroflexi_49_37 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_617739_11
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(11446..11976)
DNA (531bp) protein (177aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein id=1960932 bin=GWD2_Chloroflexi_49_16 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
HycB; Fe-S-cluster-containing hydrogenase components 2
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_617739_12
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(11954..13831)
DNA (1878bp) protein (626aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase id=1960951 bin=GWD2_Chloroflexi_49_16 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_617739_13
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(13882..14940)
DNA (1059bp) protein (353aa)
Aspartate/ornithine carbamoyltransferase id=1960937 bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_617739_14
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(14959..16302)
DNA (1344bp) protein (448aa)
Putative hydrolase id=4215810 bin=GWC2_Chloroflexi_49_37 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
putative hydrolase
Tax=GWC2_Chloroflexi_49_37_curated
SR1-18-Sp65_coassembly_scaffold_617739_15
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(16299..17684)
DNA (1386bp) protein (462aa)
Monomethylamine methyltransferase MtmB id=4215801 bin=GWC2_Chloroflexi_49_37 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Monomethylamine methyltransferase MtmB
Tax=RBG_16_Chloroflexi_48_8_curated
SR1-18-Sp65_coassembly_scaffold_617739_16
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(17824..18510)
DNA (687bp) protein (229aa)
Methanosarcina family methyltransferase cognate corrinoid protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y4Q7_BILWA
cobalamin B12-binding domain-containing protein
Tax=RBG_16_Chloroflexi_48_8_curated
SR1-18-Sp65_coassembly_scaffold_617739_17
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(18568..19674)
DNA (1107bp) protein (369aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Thermofilum sp. 1910b RepID=S6A5V6_9CREN
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKG38622.1}; TaxID=1550241 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1807-2.;"
sugar ABC transporter ATP-binding protein
SR1-18-Sp65_coassembly_scaffold_617739_18
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(19685..20521)
DNA (837bp) protein (279aa)
Putative oxidoreductase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0F4_ANATU
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAJ64703.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
SR1-18-Sp65_coassembly_scaffold_617739_19
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20532..21287)
DNA (756bp) protein (252aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.47)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C3R9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58256.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
SR1-18-Sp65_coassembly_scaffold_617739_20
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21384..22238)
DNA (855bp) protein (285aa)
ABC-type sugar transport system, permease component n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UM04_SPIAZ
sugar ABC transporter permease
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AFG38547.1}; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692).;"
SR1-18-Sp65_coassembly_scaffold_617739_21
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22235..23398)
DNA (1164bp) protein (388aa)
Permease component of ABC-type sugar transporter n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UM03_SPIAZ
sugar ABC transporter permease
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:AFG38546.1}; Flags: Precursor;; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692).;"
SR1-18-Sp65_coassembly_scaffold_617739_22
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23455..24882)
DNA (1428bp) protein (476aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UM02_SPIAZ
sugar ABC transporter periplasmic protein
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AFG38545.1}; Flags: Precursor;; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692).;"
SR1-18-Sp65_coassembly_scaffold_617739_23
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24967..25932)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036C6CA7
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AHV96734.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
SR1-18-Sp65_coassembly_scaffold_617739_24

Not on your lists

comp(26035..27480)
DNA (1446bp) protein (482aa)
MttB10 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QEX6_DESAH
Marine sediment metagenome DNA, contig: S01H4_C01389 {ECO:0000313|EMBL:GAG68006.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR1-18-Sp65_coassembly_scaffold_617739_25

Not on your lists

comp(27646..28296)
DNA (651bp) protein (217aa)
UPI0003D1B865 related cluster n=1 Tax=unknown RepID=UPI0003D1B865
Marine sediment metagenome DNA, contig: S01H1_L01223 {ECO:0000313|EMBL:GAF76736.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
mttC15; trimethylamine corrinoid protein 1
SR1-18-Sp65_coassembly_scaffold_617739_26
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28280..29173)
DNA (894bp) protein (298aa)
formylmethanofuran--tetrahydromethanopterin formyltransferase (EC:2.3.1.101)
Formylmethanofuran--tetrahydromethanopterin formyltransferase {ECO:0000256|HAMAP-Rule:MF_00579}; EC=2.3.1.101 {ECO:0000256|HAMAP-Rule:MF_00579};; H4MPT formyltransferase {ECO:0000256|HAMAP-Rule:MF_00579}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
Formylmethanofuran--tetrahydromethanopterin formyltransferase n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FIN2_9EURY
SR1-18-Sp65_coassembly_scaffold_617739_27
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(29190..30200)
DNA (1011bp) protein (337aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Providencia rettgeri DSM 1131 RepID=D4BY64_PRORE
alcohol dehydrogenase
Tax=CG_Elusi_03
SR1-18-Sp65_coassembly_scaffold_617739_28
Smithella sp. ME-1, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30197..30721)
DNA (525bp) protein (175aa)
S-adenosylhomocysteine deaminase, Methylthioadenosine deaminase {ECO:0000313|EMBL:ESP62480.1}; EC=3.5.4.28 {ECO:0000313|EMBL:ESP62480.1};; TaxID=1380771 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. ME-1.;"
S-adenosylhomocysteine deaminase, Methylthioadenosine deaminase n=1 Tax=Smithella sp. ME-1 RepID=V4F7V8_9DELT
amidohydrolase
Displaying 28 items

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