ggKbase home page

SR-2_scaffold_141_2192319

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_2192319_trna_1
unknown

Not on your lists

comp(276..347)
DNA (72bp)
transferRNA Glu
SR-2_scaffold_141_2192319_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

832..1845
DNA (1014bp) protein (338aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NR52_9SPHI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SR-2_scaffold_141_2192319_2
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1917..2273
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000372F4EB
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
SR-2_scaffold_141_2192319_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2303..3499
DNA (1197bp) protein (399aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
phosphoglycerate kinase n=1 Tax=Niabella aurantiaca RepID=UPI00035FCEB6
phosphoglycerate kinase
SR-2_scaffold_141_2192319_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3933..4526
DNA (594bp) protein (198aa)
LemA family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NR47_9SPHI
LemA family protein
LemA family protein {ECO:0000313|EMBL:AHF15443.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SR-2_scaffold_141_2192319_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4536..5123
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000372A1BC
LemA family protein
LemA family protein {ECO:0000313|EMBL:AHF15442.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SR-2_scaffold_141_2192319_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5152..5613
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NR45_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF15441.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SR-2_scaffold_141_2192319_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5618..6379
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000362B641
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF15440.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SR-2_scaffold_141_2192319_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6677..9196)
DNA (2520bp) protein (840aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB30_NIAKG
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:AEW01377.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Peptidase M1 membrane alanine aminopeptidase
SR-2_scaffold_141_2192319_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9507..11195
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB29_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01376.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SR-2_scaffold_141_2192319_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11285..12037
DNA (753bp) protein (251aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
tRNA pseudouridine synthase A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB28_NIAKG
tRNA pseudouridine synthase A
SR-2_scaffold_141_2192319_16S_1
unknown

Not on your lists

12821..13457
DNA (637bp)
16S ribosomal RNA (16S rRNA)
Displaying 12 items

View Taxonomy