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SR-2_scaffold_141_402862

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_402862_1
unknown

Not on your lists

comp(1..504)
DNA (504bp) protein (168aa)

This feature has no annotations

SR-2_scaffold_141_402862_2
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

800..2509
DNA (1710bp) protein (570aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CX99_HALOH
MiaB family RNA modification protein
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
SR-2_scaffold_141_402862_3
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

2657..3601
DNA (945bp) protein (315aa)
Ribose-phosphate pyrophosphokinase id=2110048 bin=GWD2_RBX1-related_39_127 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
PrsA; phosphoribosylpyrophosphate synthetase
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
SR-2_scaffold_141_402862_4
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

3567..4832
DNA (1266bp) protein (422aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QQ04_ACEAZ
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
SR-2_scaffold_141_402862_5
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

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4842..5789
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GJX9_CALEA
hypothetical protein
Tax=CG_Caldi_01
SR-2_scaffold_141_402862_6
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

5789..7270
DNA (1482bp) protein (494aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVB1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
SR-2_scaffold_141_402862_7
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

comp(7310..7675)
DNA (366bp) protein (122aa)
Peptidyl-tRNA hydrolase-like protein id=4721225 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
peptidyl-tRNA hydrolase-like protein
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
SR-2_scaffold_141_402862_8
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

7804..9231
DNA (1428bp) protein (476aa)
S-layer domain protein domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRI2_9FIRM
S-layer domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
SR-2_scaffold_141_402862_9
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

9228..9782
DNA (555bp) protein (185aa)
birA; bifunctional ligase/repressor BirA (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TT51_THETC
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
SR-2_scaffold_141_402862_10
RIFOXYA2_FULL_WOR_1_51_19_curated, WOR-1, Bacteria

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9792..10142
DNA (351bp) protein (117aa)
Chorismate mutase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1S9_PELTS
AroH; chorismate mutase
Tax=RIFOXYA2_FULL_WOR_1_51_19_curated
SR-2_scaffold_141_402862_11
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

10150..11169
DNA (1020bp) protein (340aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase id=3524406 bin=GWF2_OP9_related_35_9 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
SR-2_scaffold_141_402862_12
unknown

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11176..11475
DNA (300bp) protein (100aa)

This feature has no annotations

SR-2_scaffold_141_402862_13
unknown

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11460..11852
DNA (393bp) protein (131aa)

This feature has no annotations

SR-2_scaffold_141_402862_14
unknown

Not on your lists

11982..12266
DNA (285bp) protein (95aa)

This feature has no annotations

SR-2_scaffold_141_402862_15
unknown

Not on your lists

12396..12623
DNA (228bp) protein (76aa)

This feature has no annotations

SR-2_scaffold_141_402862_16
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

12634..13047
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI00038287F0
nucleic acid-binding protein
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
SR-2_scaffold_141_402862_17
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

13574..14659
DNA (1086bp) protein (362aa)
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
SR-2_scaffold_141_402862_18
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

14656..15270
DNA (615bp) protein (205aa)
menH; menaquinone biosynthesis methyltransferase MenH (EC:2.1.1.-)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI000372FC13
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
SR-2_scaffold_141_402862_19
unknown

Not on your lists

15419..17167
DNA (1749bp) protein (583aa)

This feature has no annotations

SR-2_scaffold_141_402862_20
unknown

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17187..17282
DNA (96bp) protein (32aa)

This feature has no annotations

SR-2_scaffold_141_402862_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17276..18943
DNA (1668bp) protein (556aa)
FAD dependent oxidoreductase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AX43_RUBXD
FAD dependent oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
SR-2_scaffold_141_402862_22
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

comp(18906..20006)
DNA (1101bp) protein (367aa)
GTPase HflX n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMU1_9FIRM
GTP-binding protein, HflX
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
SR-2_scaffold_141_402862_23
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

20048..21727
DNA (1680bp) protein (560aa)
type II secretion system protein E n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7812C
type II secretion system protein E
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
SR-2_scaffold_141_402862_24
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

21771..22940
DNA (1170bp) protein (390aa)
Type II secretion system F domain protein id=4847852 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
type II secretion system F domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
SR-2_scaffold_141_402862_25
RIFOXYB2_FULL_WOR_1_48_7_curated, WOR-1, Bacteria

Not on your lists

22950..23423
DNA (474bp) protein (158aa)
Putative fimbrial protein id=3078993 bin=GWA2_OP3_52_12 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
methylation site containing protein
Tax=RIFOXYB2_FULL_WOR_1_48_7_curated
SR-2_scaffold_141_402862_26
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

23463..25763
DNA (2301bp) protein (767aa)
Putative uncharacterized protein id=4574854 bin=GWC2_Deltaproteobacteria_55_46 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
SR-2_scaffold_141_402862_27
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

25817..27052
DNA (1236bp) protein (412aa)
AAA ATPase id=4001986 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=Sulfurospirillum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
ATPase AAA
Tax=GWC2_Nitrospirae_42_7_curated
SR-2_scaffold_141_402862_28
unknown

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comp(27058..28140)
DNA (1083bp) protein (361aa)

This feature has no annotations

SR-2_scaffold_141_402862_29
unknown

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comp(28198..28740)
DNA (543bp) protein (181aa)

This feature has no annotations

SR-2_scaffold_141_402862_30
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists


28838..30004
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Dendroctonus ponderosae RepID=U4TZL5_DENPD
proS; prolyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
Displaying items 1-30 of 66 in total

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