ggKbase home page

SR-2_scaffold_141_2353135

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_2353135_1
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(1..1236)
DNA (1236bp) protein (412aa)
Tetratricopeptide TPR_2 repeat protein id=3994448 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=CG_Elusi_04
SR-2_scaffold_141_2353135_2
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(1247..2482)
DNA (1236bp) protein (412aa)
Response regulator receiver protein id=4970911 bin=GWA2_Elusimicrobia_69_24 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2353135_3
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

2546..3706
DNA (1161bp) protein (387aa)
Putative integral membrane protein id=2297588 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
putative integral membrane protein
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_2353135_4
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

3703..4269
DNA (567bp) protein (189aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 id=2297589 bin=GWA2_Elusimicrobia_66_18 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2353135_5
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

4271..4567
DNA (297bp) protein (99aa)
NADH dehydrogenase subunit K (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K id=2297590 bin=GWA2_Elusimicrobia_66_18 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_2353135_6
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

4567..6417
DNA (1851bp) protein (617aa)
NADH dehydrogenase subunit L (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain L id=2297591 bin=GWA2_Elusimicrobia_66_18 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2353135_7
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

6414..7868
DNA (1455bp) protein (485aa)
nuoM; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) (EC:1.6.5.3 1.6.99.5)
NADH dehydrogenase I subunit M id=2297592 bin=GWA2_Elusimicrobia_66_18 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2353135_8
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

7865..9274
DNA (1410bp) protein (470aa)
NADH-quinone oxidoreductase subunit N id=2297593 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
NADH-quinone oxidoreductase subunit N
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_2353135_9
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

9271..9624
DNA (354bp) protein (118aa)
NADH-quinone oxidoreductase subunit A id=2297642 bin=GWA2_Elusimicrobia_66_18 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_2353135_10
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

9615..10121
DNA (507bp) protein (169aa)
NADH-quinone oxidoreductase subunit B id=2297643 bin=GWA2_Elusimicrobia_66_18 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
NADH dehydrogenase subunit B
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_2353135_11
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

10121..10591
DNA (471bp) protein (157aa)
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C id=2297644 bin=GWA2_Elusimicrobia_66_18 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2353135_12
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

10584..11930
DNA (1347bp) protein (449aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D id=2297645 bin=GWA2_Elusimicrobia_66_18 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2353135_13
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

11927..12439
DNA (513bp) protein (171aa)
Putative [Fe] hydrogenase (Fe-only hydrogenase) (Ferredoxin bidirectional hydrogenase), subunit gamma (HymA-like) id=2297646 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
NADH:ubiquinone oxidoreductase 24 kD subunit
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2353135_14
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

12436..13713
DNA (1278bp) protein (426aa)
NADH dehydrogenase subunit F id=2297647 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
NADH-quinone oxidoreductase subunit F
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_2353135_15
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

13706..15235
DNA (1530bp) protein (510aa)
NADH dehydrogenase I, G subunit (75 kDa) id=2297648 bin=GWA2_Elusimicrobia_66_18 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Molybdopterin oxidoreductase Fe4S4 region
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_2353135_16
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

15232..16269
DNA (1038bp) protein (346aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H id=2297649 bin=GWA2_Elusimicrobia_66_18 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_Elusimicrobia_66_12_curated
SR-2_scaffold_141_2353135_17
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

16266..16883
DNA (618bp) protein (206aa)
NADH-quinone oxidoreductase subunit I id=2297650 bin=GWA2_Elusimicrobia_66_18 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2353135_18
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

16880..17752
DNA (873bp) protein (291aa)
Hypothetical membrane protein id=2297651 bin=GWA2_Elusimicrobia_66_18 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2353135_19
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

17754..18815
DNA (1062bp) protein (354aa)
Phosphoesterase RecJ domain protein id=2297652 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
phosphoesterase RecJ domain-containing protein
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_2353135_20
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(18862..20481)
DNA (1620bp) protein (540aa)
Conserved hypothetical membrane protein, IniB n=1 Tax=Mycobacterium ulcerans (strain Agy99) RepID=A0PLP1_MYCUA
putative glycine-rich protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
SR-2_scaffold_141_2353135_21
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

20591..23104
DNA (2514bp) protein (838aa)
pepN; aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2] id=5043024 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Peptidase M1 membrane alanine aminopeptidase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
SR-2_scaffold_141_2353135_22
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

23136..25103
DNA (1968bp) protein (656aa)
hypothetical protein Magn03011370 id=2313801 bin=GWA2_Elusimicrobia_66_18 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_2353135_23
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

25169..26764
DNA (1596bp) protein (532aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8B8_9CHLR
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:EFH80129.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
HEAT repeat-containing PBS lyase
Displaying 23 items

View Taxonomy