ggKbase home page

SR-2_scaffold_141_3116867

Search features with annotation key words

Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_3116867_1
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(201..935)
DNA (735bp) protein (245aa)
Hemolysin id=4270702 bin=GWA2_Elusimicrobia_69_24 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hemolysin TlyA family protein
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_3116867_2
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1485..1643)
DNA (159bp) protein (53aa)
Putative uncharacterized protein id=3720806 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
SR-2_scaffold_141_3116867_3
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1689..1844)
DNA (156bp) protein (52aa)
Putative uncharacterized protein ssr0757 id=4186528 bin=GWF2_Lentisphaerae_57_35 species=Synechocystis sp. PCC 6803 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
ssr0757; hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
SR-2_scaffold_141_3116867_4
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(1951..2307)
DNA (357bp) protein (119aa)
Conserved HicB family protein id=2276864 bin=GWA2_Elusimicrobia_69_24 species=Rickettsiella grylli genus=Rickettsiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
HicB family protein
Tax=CG_Elusi_04
SR-2_scaffold_141_3116867_5
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2732..3022)
DNA (291bp) protein (97aa)
Uncharacterized protein HI_1420 id=2685010 bin=GWA2_Elusimicrobia_69_24 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_3116867_6
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3696..4298)
DNA (603bp) protein (201aa)
Putative uncharacterized protein id=2269126 bin=GWA2_Elusimicrobia_66_18 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_3116867_7
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(4449..4763)
DNA (315bp) protein (105aa)
Putative uncharacterized protein id=4985878 bin=GWA2_Elusimicrobia_56_46 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=CG_Elusi_01
SR-2_scaffold_141_3116867_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6277..7143)
DNA (867bp) protein (289aa)
Putative uncharacterized protein id=3699620 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
SR-2_scaffold_141_3116867_9
RIFOXYA2_FULL_Elusimicrobia_69_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7181..7711)
DNA (531bp) protein (177aa)
hypothetical protein id=4560773 bin=GWA2_Elusi_like_61_42 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Tax=RIFOXYA2_FULL_Elusimicrobia_69_6_curated
SR-2_scaffold_141_3116867_10
unknown

Not on your lists

comp(7772..8104)
DNA (333bp) protein (111aa)

This feature has no annotations

SR-2_scaffold_141_3116867_11
unknown

Not on your lists

comp(8217..9371)
DNA (1155bp) protein (385aa)

This feature has no annotations

SR-2_scaffold_141_3116867_12
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

9402..10172
DNA (771bp) protein (257aa)
Putative uncharacterized protein id=2414981 bin=GWA2_Elusimicrobia_69_24 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_3116867_13
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(10238..11278)
DNA (1041bp) protein (347aa)
Amine oxidase id=3889735 bin=GWA2__Bacteriovorax-rel_49_15 species=Marinomonas posidonica genus=Marinomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
NADH-ubiquinone oxidoreductase subunit 6
Tax=GWA2_Bdellovibrionales_49_15_curated
SR-2_scaffold_141_3116867_14
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(11488..12264)
DNA (777bp) protein (259aa)
Putative uncharacterized protein id=3889736 bin=GWA2__Bacteriovorax-rel_49_15 species=Trichoderma virens genus=Trichoderma taxon_order=Hypocreales taxon_class=Sordariomycetes phylum=Ascomycota tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWA2_Bdellovibrionales_49_15_curated
SR-2_scaffold_141_3116867_15
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12261..13076)
DNA (816bp) protein (272aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EC53_9BURK
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EKZ96806.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
short-chain dehydrogenase/reductase SDR
SR-2_scaffold_141_3116867_16
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13156..13806)
DNA (651bp) protein (217aa)
peptidase M28 id=2475633 bin=GWC2_Elusimicrobia_64_44 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_3116867_17
GWC2_Elusimicrobia_61_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13813..14814)
DNA (1002bp) protein (334aa)
Putative secreted protein id=1777429 bin=GWA2_Elusi-like_A8_64_40 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
hypothetical protein
Tax=GWC2_Elusimicrobia_61_19_curated
SR-2_scaffold_141_3116867_18
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14811..15518)
DNA (708bp) protein (236aa)
HAD family hydrolase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MIM9_CORCM
yihX; HAD family hydrolase
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_3116867_19
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(15515..15781)
DNA (267bp) protein (89aa)
Exodeoxyribonuclease 7 small subunit id=4013897 bin=GWA2_Elusimicrobia_69_24 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
exodeoxyribonuclease VII small subunit
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_3116867_20
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15782..17005)
DNA (1224bp) protein (408aa)
xseA; Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) (EC:3.1.11.6)
Exodeoxyribonuclease VII large subunit id=4982188 bin=GWA2_Elusimicrobia_66_18 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_3116867_21
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(16998..18302)
DNA (1305bp) protein (435aa)
ATPase family protein id=5032442 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ATPase family protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_3116867_22
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18309..18617)
DNA (309bp) protein (103aa)
Putative uncharacterized protein id=2291439 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=GWC2_Elusimicrobia_56_31_curated
SR-2_scaffold_141_3116867_23
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18614..18850)
DNA (237bp) protein (79aa)
hypothetical protein id=5032444 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_Elusimicrobia_66_12_curated
SR-2_scaffold_141_3116867_24
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18944..21364)
DNA (2421bp) protein (807aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit id=5032445 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_3116867_25
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists


comp(21348..22400)
DNA (1053bp) protein (351aa)
Phenylalanine--tRNA ligase alpha subunit id=5032446 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
phenylalanyl-tRNA synthetase, alpha subunit
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_3116867_26
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists


comp(22495..22842)
DNA (348bp) protein (116aa)
50S ribosomal protein L20 id=5032447 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
50S ribosomal protein L20
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_3116867_27
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists


comp(22849..23046)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 id=5032448 bin=GWA2_Elusimicrobia_66_18 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
50S ribosomal protein L35
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_3116867_28
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(23053..23517)
DNA (465bp) protein (155aa)
Translation initiation factor IF-3 id=5032449 bin=GWA2_Elusimicrobia_66_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
translation initiation factor IF-3
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_3116867_29
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

23681..24352
DNA (672bp) protein (224aa)
Putative uncharacterized protein id=3461742 bin=GWA2_Elusimicrobia_69_24 species=Edwardsiella tarda genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
uncharacterized protein involved in an early stage of isoprenoid biosynthesis
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_3116867_30
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

24439..25830
DNA (1392bp) protein (464aa)
Putative uncharacterized protein id=1892165 bin=GWA2_Elusimicrobia_69_24 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
putative heme d1 biosynthesis radical SAM protein NirJ1
Tax=GWA2_Elusimicrobia_69_24_curated
Displaying items 1-30 of 184 in total

View Taxonomy