ggKbase home page

SR-2_scaffold_141_4076725

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_4076725_1
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

comp(581..2116)
DNA (1536bp) protein (512aa)
hypothetical protein id=4677476 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Tax=GWC2_Elusimicrobia_56_31_curated
SR-2_scaffold_141_4076725_2
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2224..3477
DNA (1254bp) protein (418aa)
Radical SAM domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP80_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EAX48187.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
Radical SAM domain protein
SR-2_scaffold_141_4076725_trna_1
unknown

Not on your lists

3773..3856
DNA (84bp)
transferRNA Leu
SR-2_scaffold_141_4076725_3
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

3978..4622
DNA (645bp) protein (215aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme id=2209116 bin=GWA2_Elusimicrobia_66_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_4076725_4
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

4604..5461
DNA (858bp) protein (286aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase id=2209117 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
CDP-diacylglycerol/serine O-phosphatidyltransferase
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_4076725_5
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(5400..6113)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Dermabacter sp. HFH0086 RepID=S3YC05_9MICO
phosphoesterase PA-phosphatase-like protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_4076725_6
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6110..7231)
DNA (1122bp) protein (374aa)
Glycosyltransferase id=4766690 bin=GWA2_Elusimicrobia_69_24 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glycosyl transferase group 1
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_4076725_7
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7231..8253)
DNA (1023bp) protein (341aa)
Putative membrane protein id=2311437 bin=GWA2_Elusimicrobia_69_24 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_4076725_8
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8257..9276)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein id=3962801 bin=GWA2_Elusimicrobia_69_24 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_4076725_9
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9417..11321)
DNA (1905bp) protein (635aa)
Tetratricopeptide repeat protein id=4766692 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_4076725_10
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

11418..13520
DNA (2103bp) protein (701aa)
Uncharacterized conserved protein id=5019264 bin=GWA2_Elusimicrobia_69_24 species=uncultured nuHF2 cluster bacterium HF0500_31B05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=CG_Elusi_04
SR-2_scaffold_141_4076725_11
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

13580..13867
DNA (288bp) protein (96aa)
Uncharacterized protein id=3211066 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_4076725_12
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

13864..15225
DNA (1362bp) protein (454aa)
Radical SAM domain protein id=3211062 bin=GWA2_Elusimicrobia_69_24 species=Archaeoglobus profundus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Radical SAM domain protein
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_4076725_13
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

15222..16352
DNA (1131bp) protein (377aa)
Glycosyl transferase, group 1 family protein id=3210901 bin=GWA2_Elusimicrobia_69_24 species=Oceaniovalibus guishaninsula genus=Oceaniovalibus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
group 1 glycosyl transferase
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_4076725_14
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

16333..17532
DNA (1200bp) protein (400aa)
Putative glycosyltransferase, group 1 id=3210894 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glycosyl transferase
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_4076725_15
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

17529..18602
DNA (1074bp) protein (358aa)
Glycosyl transferase family 2 n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PS11_9CYAN
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AFY36210.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
SR-2_scaffold_141_4076725_16
unknown

Not on your lists

18742..18867
DNA (126bp) protein (42aa)

This feature has no annotations

SR-2_scaffold_141_4076725_17
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19002..19817
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D39B
Uncharacterized protein {ECO:0000313|EMBL:EEO48489.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
hypothetical protein
SR-2_scaffold_141_4076725_18
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

19814..20848
DNA (1035bp) protein (345aa)
Radical SAM domain protein id=4237211 bin=GWF2_OP3_43_52 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
radical SAM domain-containing protein
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
SR-2_scaffold_141_4076725_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20845..22170
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2T8_9RHOO
Predicted PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:CDM64124.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
SR-2_scaffold_141_4076725_20
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

Not on your lists

22167..23711
DNA (1545bp) protein (515aa)
Radical SAM domain protein id=4701946 bin=GWA2_Elusi_like_61_42 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
radical SAM domain-containing protein
Tax=GWA2_Elusimicrobia_61_42_curated
SR-2_scaffold_141_4076725_21
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

23698..25425
DNA (1728bp) protein (576aa)
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_4076725_22
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

25433..27562
DNA (2130bp) protein (710aa)
Glycosyl transferase family 2 id=4766698 bin=GWA2_Elusimicrobia_69_24 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
family 2 glycosyl transferase
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_4076725_23
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(27495..28565)
DNA (1071bp) protein (357aa)
hypothetical protein id=3380047 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_4076725_24
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28611..29921
DNA (1311bp) protein (437aa)
Putative transmembrane protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZIV0_XANCT
Putative transmembrane protein {ECO:0000313|EMBL:EKU26513.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
transmembrane protein
SR-2_scaffold_141_4076725_25
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

29931..31001
DNA (1071bp) protein (357aa)
Glycosyl transferase n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GEY1_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIJ85147.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
glycosyl transferase family 2
SR-2_scaffold_141_4076725_26
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

30998..31756
DNA (759bp) protein (253aa)
Polysaccharide ABC exporter membrane-spanning protein id=4970929 bin=GWA2_Elusimicrobia_69_24 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Polysaccharide ABC transporter, permease protein
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_4076725_27
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

31753..32439
DNA (687bp) protein (229aa)
ABC transporter related protein n=1 Tax=Frankia sp. EUN1f RepID=D3CSN3_9ACTO
rfbB-2; polysaccharide ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_4076725_28
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

32440..33942
DNA (1503bp) protein (501aa)
hypothetical protein id=4766694 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_4076725_29
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

33939..34412
DNA (474bp) protein (158aa)
Tetratricopeptide repeat protein id=4766692 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
Displaying items 1-30 of 76 in total

View Taxonomy