ggKbase home page

SR-2_scaffold_141_53560

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_53560_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..212
DNA (210bp) protein (70aa)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TU35_9PROT
Exodeoxyribonuclease 7 large subunit {ECO:0000313|EMBL:CAM74142.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
exonuclease VII large subunit
SR-2_scaffold_141_53560_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221..820)
DNA (600bp) protein (200aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U387_9PROT
hypothetical protein
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:CAM77344.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
SR-2_scaffold_141_53560_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(888..1802)
DNA (915bp) protein (305aa)
Heat shock protein HSP33 n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3S8_9PROT
hslO; heat shock protein HSP33
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
SR-2_scaffold_141_53560_4
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1810..2175)
DNA (366bp) protein (122aa)
XRE family transcriptional regulator n=1 Tax=Methylomonas sp. MK1 RepID=UPI000366D132
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEF98661.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
SR-2_scaffold_141_53560_5
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2172..2447)
DNA (276bp) protein (92aa)
Gp81 n=1 Tax=Burkholderia pseudomallei 1710a RepID=C6TYS2_BURPE
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:EYS95411.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
plasmid stabilization system family protein
SR-2_scaffold_141_53560_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2494..3399)
DNA (906bp) protein (302aa)
argF; ornithine carbamoyltransferase 2, chain F; CP4-6 prophage (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Ornithine carbamoyltransferase 2, chain F CP4-6 prophage n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F783_9PROT
SR-2_scaffold_141_53560_7
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3396..4553)
DNA (1158bp) protein (386aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Acetylornithine aminotransferase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAK5_MAGSA
ornithine/acetylornithine aminotransferase
SR-2_scaffold_141_53560_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4675..5169
DNA (495bp) protein (165aa)
Serine kinase of the HPr protein, regulates carb ohydrate metabolism n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U5S0_9PROT
Putative HPr kinase/phosphorylase
Serine kinase of the HPr protein, regulates carb ohydrate metabolism {ECO:0000313|EMBL:CAM78227.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
SR-2_scaffold_141_53560_9
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5169..6083
DNA (915bp) protein (305aa)
UPF0042 nucleotide-binding protein H261_09522 n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3ABL6_9PROT
Nucleotide-binding protein CCC_00676 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
hypothetical protein
SR-2_scaffold_141_53560_10
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6103..6510
DNA (408bp) protein (136aa)
Phosphotransferase system, mannose/fructose-specific component IIA n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VYX6_MAGSA
phosphotransferase system, mannose/fructose-specific component IIA
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:BAE53199.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SR-2_scaffold_141_53560_11
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6507..6800
DNA (294bp) protein (98aa)
Phosphotransferase system, HPr-related protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2VYX7_MAGSA
phosphotransferase system, HPr-related protein
Phosphotransferase system, HPr-related protein {ECO:0000313|EMBL:BAE53198.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SR-2_scaffold_141_53560_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6869..8656
DNA (1788bp) protein (596aa)
ptsI; Phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732, ECO:0000313|EMBL:CDK99003.1}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732, ECO:0000313|EMBL:CDK99003.1};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3D7_9PROT
SR-2_scaffold_141_53560_13
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8697..9545
DNA (849bp) protein (283aa)
KilA domain-containing protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NV08_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJS40357.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
hypothetical protein
SR-2_scaffold_141_53560_14
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9622..11016
DNA (1395bp) protein (465aa)
putative Zn-dependent protease (EC:3.4.24.-)
Putative Zn-dependent protease n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FUL4_PHAMO
Putative Zn-dependent protease {ECO:0000313|EMBL:CCG42052.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
SR-2_scaffold_141_53560_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11016..12308
DNA (1293bp) protein (431aa)
putative Zn-dependent protease (EC:3.4.24.-)
Putative Zn-dependent protease {ECO:0000313|EMBL:CDK99983.1}; EC=3.4.24.- {ECO:0000313|EMBL:CDK99983.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Putative Zn-dependent protease n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F651_9PROT
SR-2_scaffold_141_53560_16
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12363..12590)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F599_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDK99471.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
SR-2_scaffold_141_53560_17
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12682..13125)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A8Q9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME68899.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
hypothetical protein
SR-2_scaffold_141_53560_18
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13344..13559
DNA (216bp) protein (72aa)
Regulator of stationary/sporulation gene expression n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y793_THIV6
Transcriptional regulator {ECO:0000313|EMBL:KJR61650.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
regulator of stationary/sporulation gene expression
SR-2_scaffold_141_53560_19
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13546..13893
DNA (348bp) protein (116aa)
PemK-like protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z7Q0_9PROT
PemK-like protein {ECO:0000313|EMBL:EME70350.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
PemK-like protein
SR-2_scaffold_141_53560_20
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13972..15333
DNA (1362bp) protein (454aa)
TPR repeat n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYF1_9PROT
TPR repeat {ECO:0000313|EMBL:CAM75658.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
TPR repeat-containing protein
SR-2_scaffold_141_53560_21
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15571..15795)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A5Y0_ALKEH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI57757.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
SR-2_scaffold_141_53560_22
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15871..16362)
DNA (492bp) protein (164aa)
Sugar kinases, ribokinase family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYF0_9PROT
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CAM75657.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
SR-2_scaffold_141_53560_23
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16359..16796)
DNA (438bp) protein (146aa)
Putative Cell wall hydrolyse n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F243_9PROT
putative Cell wall hydrolyse
Putative Cell wall hydrolyse {ECO:0000313|EMBL:CDK99457.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
SR-2_scaffold_141_53560_24
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16793..17092)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F4N8_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDK99458.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
SR-2_scaffold_141_53560_25
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17290..17949)
DNA (660bp) protein (220aa)
Intracellular growth attenuator protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F307_9PROT
igaA; intracellular growth attenuator protein
Intracellular growth attenuator protein {ECO:0000313|EMBL:CDK99915.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Displaying 25 items

View Taxonomy