ggKbase home page

SR-2_scaffold_141_2812554

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_2812554_1
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2..448)
DNA (447bp) protein (149aa)
N-terminal double-transmembrane domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBI8_SINAD
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
SR-2_scaffold_141_2812554_2
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(603..1547)
DNA (945bp) protein (315aa)
Putative uncharacterized protein id=3624217 bin=GWF2_Lentisphaerae_49_21 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
SR-2_scaffold_141_2812554_3
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(1634..2671)
DNA (1038bp) protein (346aa)
MoxR-like ATPases (EC:3.6.3.-)
MoxR-like ATPases {ECO:0000313|EMBL:CCW33977.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCW33977.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D43EFF
SR-2_scaffold_141_2812554_4
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2710..3468)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETJ4_9BACT
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
SR-2_scaffold_141_2812554_5
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(3471..4622)
DNA (1152bp) protein (384aa)
hypothetical protein VspiD_14905 id=4479620 bin=GWF2_Lentisphaerae_52_8 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
cycloartenol synthase-like protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SR-2_scaffold_141_2812554_6
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4688..6907)
DNA (2220bp) protein (740aa)
Carboxyl-terminal protease n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6P1_9BACT
prc; Periplasmic protease
Tax=GWF2_Verrucomicrobia_62_7_curated
SR-2_scaffold_141_2812554_7
unknown

Not on your lists

comp(7051..7236)
DNA (186bp) protein (62aa)

This feature has no annotations

SR-2_scaffold_141_2812554_8
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7407..8636
DNA (1230bp) protein (410aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG78_9BACT
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Tax=GWF2_Verrucomicrobia_62_7_curated
SR-2_scaffold_141_2812554_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8690..9172)
DNA (483bp) protein (161aa)
Cytidyltransferase-related domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU38_9BACT
RfaeE domain II
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SR-2_scaffold_141_2812554_trna_1
unknown

Not on your lists

9292..9374
DNA (83bp)
transferRNA Tyr
SR-2_scaffold_141_2812554_10
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9517..10092
DNA (576bp) protein (192aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
nicotinate-nucleotide adenylyltransferase id=3662701 bin=GWF2_Lentisphaerae_57_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Verrucomicrobia_62_7_curated
SR-2_scaffold_141_2812554_11
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10092..10442
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00037288A9
iojap family protein
Tax=GWF2_Verrucomicrobia_62_7_curated
SR-2_scaffold_141_2812554_12
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10491..15092)
DNA (4602bp) protein (1534aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037FC371
acrB; acriflavine resistance protein B
Acriflavine resistance protein B {ECO:0000313|EMBL:CCE23834.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
SR-2_scaffold_141_2812554_13
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(15098..16243)
DNA (1146bp) protein (382aa)
Efflux pump periplasmic linker BepF n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C6H1_9GAMM
HlyD family multidrug efflux protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
SR-2_scaffold_141_2812554_14
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16275..16964)
DNA (690bp) protein (230aa)
TetR family transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TI98_TISMK
acnR; TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AFK52486.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SR-2_scaffold_141_2812554_15
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists


comp(17236..18975)
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI0003635651
argS; Arginyl-tRNA synthetase
Tax=CG_Arma_01
SR-2_scaffold_141_2812554_16
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19052..19513)
DNA (462bp) protein (154aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEC3_9BACT
PTS system fructose subfamily transporter subunit IIC
Tax=GWF2_Verrucomicrobia_62_7_curated
SR-2_scaffold_141_2812554_17
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19578..20291)
DNA (714bp) protein (238aa)
Putative uncharacterized protein id=4322913 bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
SR-2_scaffold_141_2812554_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


20394..20681
DNA (288bp) protein (96aa)
30S ribosomal protein S20 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNE7_9BACT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S20
SR-2_scaffold_141_2812554_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(20761..21258)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4J3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18446.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SR-2_scaffold_141_2812554_20
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(21255..22316)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036C0BBD
TPR repeats containing protein {ECO:0000313|EMBL:CCG91940.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;"
nrfG; TPR repeats containing protein
Displaying 21 items

View Taxonomy