ggKbase home page

SR-2_scaffold_141_857283

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_857283_1
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150..1217
DNA (1068bp) protein (356aa)
obgE; GTPase ObgE (EC:3.6.1.-)
GTPase Obg n=2 Tax=Burkholderiaceae RepID=OBG_CUPNH
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
SR-2_scaffold_141_857283_2
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1468..2589
DNA (1122bp) protein (374aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AMB0_9PROT
Tax=RBG_16_Betaproteobacteria_58_11_curated
SR-2_scaffold_141_857283_3
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2733..4160
DNA (1428bp) protein (476aa)
ATP-independent RNA helicase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHL5_9PROT
ATP-independent RNA helicase
ATP-independent RNA helicase {ECO:0000313|EMBL:BAN34014.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SR-2_scaffold_141_857283_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4420..5193
DNA (774bp) protein (258aa)
DnaJ-like protein DjlA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFC3_9PROT
DnaJ-like protein DjlA {ECO:0000313|EMBL:CCU61781.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
djlA; Dna-J like membrane chaperone protein
SR-2_scaffold_141_857283_5
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5301..6287)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Pseudomonas syringae pv. japonica str. M301072 RepID=F3FRB2_PSESX
Uncharacterized protein {ECO:0000313|EMBL:EGH32754.1}; TaxID=629262 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. japonica str. M301072.;"
hypothetical protein
SR-2_scaffold_141_857283_6
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6606..7520)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WA12_BURSC
Uncharacterized protein {ECO:0000313|EMBL:KHL11688.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
hypothetical protein
SR-2_scaffold_141_857283_7
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7517..8326)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WA13_BURSC
Uncharacterized protein {ECO:0000313|EMBL:KHL11687.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
hypothetical protein
SR-2_scaffold_141_857283_8
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9008..9715
DNA (708bp) protein (236aa)
RNA-binding S4 domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AD18_9PROT
RNA-binding protein S4 {ECO:0000313|EMBL:GAO37398.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
RNA-binding S4 domain-containing protein
SR-2_scaffold_141_857283_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9737..10066)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JPC7_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM47358.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
SR-2_scaffold_141_857283_10
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10081..10332)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JPC7_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM47358.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
SR-2_scaffold_141_857283_11
unknown

Not on your lists

comp(10325..10552)
DNA (228bp) protein (76aa)

This feature has no annotations

SR-2_scaffold_141_857283_12
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10654..11580)
DNA (927bp) protein (309aa)
histone deacetylase family protein id=12493851 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Histone deacetylase
Tax=GWA2_Gallionellales_60_142_curated
SR-2_scaffold_141_857283_13
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11773..12567)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00036DE859
Tol-pal system protein YbgF {ECO:0000313|EMBL:GAO35798.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
tol-pal system protein YbgF
SR-2_scaffold_141_857283_14
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12569..13096)
DNA (528bp) protein (176aa)
OmpA/MotB domain containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIZ6_9PROT
OmpA/MotB domain containing protein
OmpA/MotB domain containing protein {ECO:0000313|EMBL:BAN34519.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SR-2_scaffold_141_857283_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13132..14436)
DNA (1305bp) protein (435aa)
Protein TolB n=2 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=TOLB_METFK
TolB-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SR-2_scaffold_141_857283_16
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14440..15120)
DNA (681bp) protein (227aa)
Protein TolA n=2 Tax=Methylovorus RepID=C6XA96_METSD
protein tola
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
SR-2_scaffold_141_857283_17
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15159..15551)
DNA (393bp) protein (131aa)
Protein TolR n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF68_9PROT
Biopolymer transporter ExbD {ECO:0000313|EMBL:GAO35802.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
protein TolR
SR-2_scaffold_141_857283_18
unknown

Not on your lists

comp(15580..15711)
DNA (132bp) protein (44aa)

This feature has no annotations

SR-2_scaffold_141_857283_19
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15725..16408)
DNA (684bp) protein (228aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9Q4_9PROT
MotA/TolQ/ExbB proton channel
Tax=RBG_16_Betaproteobacteria_58_11_curated
SR-2_scaffold_141_857283_20
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16405..16830)
DNA (426bp) protein (142aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIZ3_9PROT
4-hydroxybenzoyl-CoA thioesterase
Tax=RBG_16_Betaproteobacteria_58_11_curated
SR-2_scaffold_141_857283_21
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16827..17870)
DNA (1044bp) protein (348aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
Holliday junction ATP-dependent DNA helicase RuvB n=5 Tax=Ralstonia RepID=RUVB_RALPJ
ruvB; Holliday junction DNA helicase RuvB
SR-2_scaffold_141_857283_22
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17885..18310)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKJ1_9PROT
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_62_13__curated
SR-2_scaffold_141_857283_23
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18307..18978)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLX5_METPP
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_62_13__curated
SR-2_scaffold_141_857283_24
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18986..19567)
DNA (582bp) protein (194aa)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Azoarcus sp. (strain BH72) RepID=RUVA_AZOSB
ATP-dependent DNA helicase RuvA
Tax=RBG_16_Betaproteobacteria_58_11_curated
SR-2_scaffold_141_857283_25
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19564..20115)
DNA (552bp) protein (184aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMR6_SIDLE
Tax=RBG_16_Betaproteobacteria_58_11_curated
Displaying 25 items

View Taxonomy